Job Description P0AA10 Confidence 100.00% Date Thu Jan 5 11:11:44 GMT 2012 Rank 12 Aligned Residues 117 % Identity 29% Template c4a1aI_ PDB info PDB header:ribosome Chain: I: PDB Molecule:60s ribosomal protein l13a; PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 3. Resolution 3.52 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	W	Y	V	V	D	A	T	G	K	T	L	G	R	L	A	T	E	L	A	R	R	L	R	G	K	H	K	A	E	Y	T	P	H	V	D	T	G	D	Y	I	I	V	L	N	A	D	K	V	A	V	T	G	N	K	R	T	D	K	V	Y	Y	H	H	T	G	H	I	G	G	I	K	Q	A	T	F	E	E	M
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	K	L	V	V	I	D	A	K	G	H	L	L	G	R	L	A	S	Y	V	A	K	E	L	L	.	.	.	.	.	.	.	.	.	.	.	.	S	G	Q	R	I	V	V	V	R	T	E	A	I	N	I	S	G	S	L	F	R	N	R	V	K	F	S	E	F	L	N	K	W	M	N	H	N	P	R	R	G	V	Q
Template Known Secondary structure		S	S							T	T	B	B														.	.	.	.	.	.	.	.	.	.	.	.	T	T								G	G	G					S														T				S	S		T	T	S	S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.													.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		I	A	R	R	P	E	R	V	I	E	I	A	V	K	G	M	L	P	.	K	G	P	L	G	R	A	M	F	R	K	L	K	V	Y	A	G	N	E	H	N	H	A	A	Q	Q	P	Q	V	L	D
Query Conservation																				.
Alig confidence																				.
Template Conservation
Template Sequence		H	F	R	A	P	S	R	I	F	W	R	A	V	R	G	M	L	P	H	K	T	P	K	G	A	A	A	L	E	R	L	K	I	F	E	G	I	P	T	P	Y	D	R	V	K	K	Q	V	V	V
Template Known Secondary structure					S											T	T	T	T	T	T	S														S	S			G	G	G	T	T	S			B			G
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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