Job Description P0AA10 Confidence 100.00% Date Thu Jan 5 11:11:44 GMT 2012 Rank 9 Aligned Residues 125 % Identity 23% Template c3iz5K_ PDB info PDB header:ribosome Chain: K: PDB Molecule:60s ribosomal protein l13a (l13p); PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome Resolution 5.50 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	K	P	E	T	V	K	R	D	W	Y	V	V	D	A	T	G	K	T	L	G	R	L	A	T	E	L	A	R	R	L	R	G	K	H	K	A	E	Y	T	P	H	V	D	T	G	D	Y	I	I	V	L	N	A	D	K	V	A	V	T	G	N	K	R	T	D	K	V	Y	Y	H	H	T	G	H	I	G	G	I
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	V	S	G	S	G	V	C	A	K	R	V	V	V	D	A	R	H	H	M	L	G	R	L	A	S	I	V	A	K	E	L	L	N	G	Q	R	.	.	.	.	.	.	.	.	.	.	.	.	V	V	V	V	R	C	E	E	I	C	M	S	G	G	L	V	R	Q	K	M	K	Y	L	R	F	L	R	K	R	M	N
Template Known Secondary structure					S	S	S			S	S							T	T	B	B														T	T			.	.	.	.	.	.	.	.	.	.	.	.						G	G	G					S																T	T
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.													.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		K	Q	A	T	F	E	E	M	I	A	R	R	P	E	R	V	I	E	I	A	V	K	G	M	L	P	.	K	G	P	L	G	R	A	M	F	R	K	L	K	V	Y	A	G	N	E	H	N	H	A	A	Q	Q	P	Q	V	L	D
Query Conservation																												.
Alig confidence																												.
Template Conservation
Template Sequence		T	K	P	S	H	G	P	I	H	F	R	A	P	A	K	I	L	W	R	T	I	R	G	M	I	P	H	K	T	A	R	G	E	A	A	L	A	R	L	K	A	Y	E	G	V	P	P	P	Y	D	R	T	K	R	M	V	I	P
Template Known Secondary structure		S		S	S	S		S					S													S		T	T	S								T	T					S	S			T	T			S			B			T	T
Template Predicted Secondary structure
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions