Job Description P0AA10 Confidence 100.00% Date Thu Jan 5 11:11:44 GMT 2012 Rank 10 Aligned Residues 115 % Identity 27% Template c2zkrj_ PDB info PDB header:ribosomal protein/rna Chain: J: PDB Molecule:rna expansion segment es15 part ii; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	V	V	D	A	T	G	K	T	L	G	R	L	A	T	E	L	A	R	R	L	R	G	K	H	K	A	E	Y	T	P	H	V	D	T	G	D	Y	I	I	V	L	N	A	D	K	V	A	V	T	G	N	K	R	T	D	K	V	Y	Y	H	H	T	G	H	I	G	G	I	K	Q	A	T	F	E	E	M	I	A	R
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	L	D	G	R	G	H	L	L	G	R	L	A	A	I	V	A	K	Q	V	L	.	.	.	.	.	.	.	.	.	.	.	.	L	G	R	K	V	V	V	V	R	C	E	G	I	N	I	S	G	N	F	Y	R	N	K	L	N	Y	L	A	F	L	R	K	R	M	N	T	N	P	S	R	G	P	Y	D	F	R
Template Known Secondary structure							T	T	B	B														.	.	.	.	.	.	.	.	.	.	.	.		T								G	G	G					S									S	S	S	S	S									S	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.													.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		R	P	E	R	V	I	E	I	A	V	K	G	M	L	P	.	K	G	P	L	G	R	A	M	F	R	K	L	K	V	Y	A	G	N	E	H	N	H	A	A	Q	Q	P	Q	V	L	D	I
Query Conservation																	.
Alig confidence																	.
Template Conservation
Template Sequence		A	P	S	R	I	F	W	R	T	V	R	G	M	L	P	H	K	T	K	R	G	Q	A	A	L	D	R	L	K	V	F	D	G	I	P	P	P	Y	D	K	K	K	R	M	V	V	P	A
Template Known Secondary structure		S													S		T	T	S									T					S		S	S		S	S	S	S			B			G	G	G
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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