Job Description P0AA10 Confidence 100.00% Date Thu Jan 5 11:11:44 GMT 2012 Rank 6 Aligned Residues 142 % Identity 33% Template c2ftcH_ PDB info PDB header:ribosome Chain: H: PDB Molecule:39s ribosomal protein l13, mitochondrial; PDBTitle: structural model for the large subunit of the mammalian mitochondrial2 ribosome Resolution 12.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.				.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.
Query SS confidence										.	.	.
Query Sequence		M	K	T	F	T	A	K	P	.	.	.	E	T	V	K	R	D	W	Y	V	V	D	A	T	G	K	T	L	G	R	L	A	T	E	L	A	R	R	L	R	G	K	H	K	A	E	Y	T	P	H	V	D	T	G	D	Y	I	I	V	L	N	A	D	K	V	A	V	T	G	N	K	R	T	D	K	V	Y	Y	H	H
Query Conservation										.	.	.
Alig confidence										.	.	.
Template Conservation
Template Sequence		M	S	S	F	S	R	A	P	Q	Q	W	A	T	F	A	R	I	W	Y	L	L	D	G	K	M	Q	P	P	G	K	L	A	A	M	A	S	I	R	L	Q	G	L	H	K	P	V	Y	H	A	L	S	D	C	G	D	H	V	V	I	M	N	T	R	H	I	A	F	S	G	N	K	W	E	Q	K	V	Y	S	S	H
Template Known Secondary structure							S	S		S		B	T	T	B					B	B					S	S		S	T	T					T	T	T	T	S	S	S		S	S	S				T	T	S												T	T					G	G	G	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	H	I	G	G	I	K	Q	A	T	F	E	E	M	I	A	R	R	P	E	R	V	I	E	I	A	V	K	G	M	L	P	K	G	P	L	G	R	A	M	F	R	K	L	K	V	Y	A	G	N	E	H	N	H	A	A	Q	Q	P	Q	V	L	D	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	G	Y	P	G	G	F	R	Q	V	T	A	A	Q	L	H	L	R	D	P	V	A	I	V	K	L	A	I	Y	G	M	L	P	K	N	L	H	R	R	T	M	M	E	R	L	H	L	F	P	D	E	Y	I	P	E	D	I	L	K	N	L	V	E	E	L
Template Known Secondary structure				S	S	S								S	S	S	S		S	S	S									T	T				S	S	T	T	S	S	T	T	T	T	T						S	S	S					T	S		S				B
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions