Job Description P0AA10 Confidence 100.00% Date Thu Jan 5 11:11:44 GMT 2012 Rank 8 Aligned Residues 117 % Identity 27% Template c1s1iM_ PDB info PDB header:ribosome Chain: M: PDB Molecule:60s ribosomal protein l16-a; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1i,4 contains 60s subunit. the 40s ribosomal subunit is in file5 1s1h. Resolution 11.70 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	W	Y	V	V	D	A	T	G	K	T	L	G	R	L	A	T	E	L	A	R	R	L	R	G	K	H	K	A	E	Y	T	P	H	V	D	T	G	D	Y	I	I	V	L	N	A	D	K	V	A	V	T	G	N	K	R	T	D	K	V	Y	Y	H	H	T	G	H	I	G	G	I	K	Q	A	T	F	E	E	M
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	P	V	V	V	I	D	G	K	G	H	L	V	G	R	L	A	S	V	V	A	K	Q	L	L	N	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	K	I	V	V	V	R	A	E	E	L	N	I	S	G	E	F	F	R	N	K	L	K	Y	H	D	F	L	R	K	A	T	A	F	N	K	T	R	G	P	F
Template Known Secondary structure				S	S		B			S	S		B					T	T	T	T	T	T					.	.	.	.	.	.	.	.	.	.	.	.	T									S	S		B		S	S		S	S	T	T	T	T	T	T	T		T	T	T	T	S	T	T			S	T	T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.													.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		I	A	R	R	P	E	R	V	I	E	I	A	V	K	G	M	L	P	.	K	G	P	L	G	R	A	M	F	R	K	L	K	V	Y	A	G	N	E	H	N	H	A	A	Q	Q	P	Q	V	L	D
Query Conservation																				.
Alig confidence																				.
Template Conservation
Template Sequence		H	F	R	A	P	S	R	I	F	Y	K	A	L	R	G	M	V	S	H	K	T	A	R	G	K	A	A	L	E	R	L	K	V	F	E	G	I	P	P	P	Y	D	K	K	K	R	V	V	V	P
Template Known Secondary structure					S											T	T	S			S	S	S	T	T	S	S	T	T	T	T							S	S		S	S	S	S			B			T	T
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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