Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8U0
Confidence83.01%DateThu Jan 5 11:08:44 GMT 2012
Rank5Aligned Residues110
% Identity15%Templated2paga1
SCOP infoSMI1/KNR4-like SMI1/KNR4-like SMI1/KNR4-like
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   53......60.........70.........80.........90.........100.........110.........120.........130..
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  PQPFTGEQNVNAVERAFDIVIQPTIHTFYTTQFAGDMHAQFGDIKLTLLQTWSEDDFRRVQENLIGHLVTQKRLKLPPTL
Query Conservation 

 
     
  

 

 
 

 

  

       
        
 





  








 

 







 


Alig confidence 


































......






















....










.
Template Conservation      

   
   
  

  

  

 

   

 ......  
        
      


  ....       

  .
Template Sequence  PLELPDEDQLVEIEEQLFINIPFVFKEFLLTVSDV. . . . . . VYGSLEPVTVTDPQSHTYLPEVC. . . . ATAWDLGVPRE.
Template Known Secondary structure 





T



TT
......
BTTB
B
BSS
TTSTTB....T

TT.
Template Predicted Secondary structure 












......












....





.
Template SS confidence 















































































   18.20.........30.........40.........50.. .......60.........70..... ....80......
 
   133......140.........150.........160.........170......
Predicted Secondary structure 

















Query SS confidence 











































Query Sequence  FIATLEEELEVISVCNLSGEVCKETLGTRKRTHLASNLAEFLNQ
Query Conservation 


    
  





 



 

  
      

 





  
Alig confidence 














.















..









Template Conservation 




 


   


.  
 
  


    
 ..


   
   
Template Sequence  LIPICQDGEDYYCVE. EDGTVLLWSALVTEES. . WESVWHWARD
Template Known Secondary structure  STT
.TTS



..SS
Template Predicted Secondary structure 



.










..



Template SS confidence 











































   87..90.........100. ........110....... ..120.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions