Job Description P0A8U0 Confidence 6.84% Date Thu Jan 5 11:08:44 GMT 2012 Rank 39 Aligned Residues 68 % Identity 9% Template c3iu6A_ PDB info PDB header:transcription Chain: A: PDB Molecule:protein polybromo-1; PDBTitle: crystal structure of the sixth bromodomain of human poly-bromodomain2 containing protein 1 (pb1) Resolution 1.79 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		L	T	A	Q	A	L	K	D	F	T	A	R	Y	C	D	A	W	H	E	E	H	K	S	W	.	P	L	S	E	E	L	Y	G	V	P	S	P	C	I	I	S	T	T	E	D	A	V	Y	W	Q	P	Q	P	F	T	G	E	Q	N	V	N	A	V	E	R	A	F	D	I	V	I	Q	P	T	I	H	T	F	Y	T
Query Conservation																										.
Alig confidence																										.																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	V	T	L	L	I	Q	E	L	I	H	N	L	F	V	S	V	M	S	H	Q	D	D	E	G	R	Y	S	D	S	L	A	E	I	P	A	V	D	P	N	F	P	N	K	P	P	.	.	.	.	.	.	.	.	.	.	.	L	T	F	D	I	I	R	K	N	V	E	N	N	R	Y	R	R	L	D	L	F	Q	E
Template Known Secondary structure																				T				T	T				G	G	G	G	T	T			S	S		T	T	S	T	T	S			.	.	.	.	.	.	.	.	.	.	.												T	T
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		741	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.												.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions