Job Description P0A8U0 Confidence 100.00% Date Thu Jan 5 11:08:44 GMT 2012 Rank 1 Aligned Residues 181 % Identity 100% Template c3ffvA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:protein syd; PDBTitle: crystal structure analysis of syd Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	D	L	T	A	Q	A	L	K	D	F	T	A	R	Y	C	D	A	W	H	E	E	H	K	S	W	P	L	S	E	E	L	Y	G	V	P	S	P	C	I	I	S	T	T	E	D	A	V	Y	W	Q	P	Q	P	F	T	G	E	Q	N	V	N	A	V	E	R	A	F	D	I	V	I	Q	P	T	I	H	T	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	D	D	L	T	A	Q	A	L	K	D	F	T	A	R	Y	C	D	A	W	H	E	E	H	K	S	W	P	L	S	E	E	L	Y	G	V	P	S	P	C	I	I	S	T	T	E	D	A	V	Y	W	Q	P	Q	P	F	T	G	E	Q	N	V	N	A	V	E	R	A	F	D	I	V	I	Q	P	T	I	H	T	F
Template Known Secondary structure																										S	S	S				S	T	T	T	T	S			T	T						S	S											S		S	S								S	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	T	T	Q	F	A	G	D	M	H	A	Q	F	G	D	I	K	L	T	L	L	Q	T	W	S	E	D	D	F	R	R	V	Q	E	N	L	I	G	H	L	V	T	Q	K	R	L	K	L	P	P	T	L	F	I	A	T	L	E	E	E	L	E	V	I	S	V	C	N	L	S	G	E	V	C	K	E	T	L	G	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	T	T	Q	F	A	G	D	M	H	A	Q	F	G	D	I	K	L	T	L	L	Q	T	W	S	E	D	D	F	R	R	V	Q	E	N	L	I	G	H	L	V	T	Q	K	R	L	K	L	P	P	T	L	F	I	A	T	L	E	E	E	L	E	V	I	S	V	C	N	L	S	G	E	V	C	K	E	T	L	G	T
Template Known Secondary structure		T	S	S											T	T										S																					T	T											S	S	T	T							T	T	T								T	T	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	R	T	H	L	A	S	N	L	A	E	F	L	N	Q	L	K	P	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	K	R	T	H	L	A	S	N	L	A	E	F	L	N	Q	L	K	P	L	L
Template Known Secondary structure		S							S	S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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