Job Description P0A8U0 Confidence 5.52% Date Thu Jan 5 11:08:44 GMT 2012 Rank 48 Aligned Residues 49 % Identity 20% Template c3b79A_ PDB info PDB header:nucleotide binding protein Chain: A: PDB Molecule:toxin secretion atp-binding protein; PDBTitle: crystal structure of the n-terminal peptidase c39 like2 domain of the toxin secretion atp-binding protein from3 vibrio parahaemolyticus Resolution 1.37 Å

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		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.						.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.
Query SS confidence																															.	.	.	.	.
Query Sequence		K	R	L	K	L	P	P	T	L	F	I	A	T	L	E	E	E	L	E	V	I	S	V	C	N	L	S	G	E	.	.	.	.	.	V	C	K	E	T	L	G	T	R	K	R	T	H	L	A	S	N	L	A	E	F	L	N	Q
Query Conservation																															.	.	.	.	.
Alig confidence																							.								.	.	.	.	.														.	.	.
Template Conservation																							.																										.	.	.
Template Sequence		E	K	I	S	S	L	I	L	P	A	I	L	V	L	K	G	G	D	S	C	V	.	L	N	S	I	N	X	E	T	R	E	A	E	V	T	T	L	E	S	G	X	V	P	I	S	I	.	.	.	P	L	E	D	L	L	E	Q
Template Known Secondary structure		G	G	S		G	G	G		S						G	G	G					.						T	T	T	T							T	T	T	T	T	S					.	.	.
Template Predicted Secondary structure																							.																										.	.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.				.	.	.	.	110	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions