Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8U0
Confidence14.33%DateThu Jan 5 11:08:44 GMT 2012
Rank14Aligned Residues119
% Identity13%Templatec1q2lA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:protease iii; PDBTitle: crystal structure of pitrilysin
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   53......60.........70.........80.........90.........100.........110.........120.........130..
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  PQPFTGEQNVNAVERAFDIVIQPTIHTFYTTQFAGDMHAQFGDIKLTLLQTWSEDDFRRVQENLIGHLVTQKRLKLPPTL
Query Conservation 

 
     
  

 

 
 

 

  

       
        
 





  








 

 







 


Alig confidence 















































......

























Template Conservation   
     
    
         
 
  

   
 
 

 


 
    ......      
   
  
            
Template Sequence  PGSKFSGGNLETLSDKPGNPVQQALKDFHEKYYSANLMKAVIYSNKPL. . . . . . PELAKMAADTFGRVPNKESKKPEITV
Template Known Secondary structure  GGGS

S

S
BTTB


TTT
SS
......TGGGS










S
Template Predicted Secondary structure 



















......












Template SS confidence 















































































   194.....200.........210.........220.........230.........240. ........250.........260.......
 
   133......140....... ..150.........160.........170.......
Predicted Secondary structure 




..













Query SS confidence 














. .





























Query Sequence  FIATLEEELEVISVC. . NLSGEVCKETLGTRKRTHLASNLAEFLNQL
Query Conservation 


    
  




..
 



 

  
      

 





  
Alig confidence 














..





























Template Conservation                        
 
                  
  
Template Sequence  PVVTDAQKGIIIHYVPALPRKVLRVEFRIDNNSAKFRSKTDELITYL
Template Known Secondary structure 
S

GGGSS

SS




GGGGGG
Template Predicted Secondary structure 





















Template SS confidence 














































   268.270.........280.........290.........300.........310....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions