Job Description P77213 Confidence 5.11% Date Thu Jan 5 12:26:23 GMT 2012 Rank 58 Aligned Residues 69 % Identity 17% Template d2eiaa1 SCOP info Acyl carrier protein-like Retrovirus capsid dimerization domain-like Retrovirus capsid protein C-terminal domain Resolution 2.70

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		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.		.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		G	V	I	T	D	P	H	T	G	D	R	R	P	L	T	E	D	T	L	R	L	L	E	K	I	A	P	S	A	H	K	I	G	A	S	S	A	I	E	A	L	H	R	Q	V	V	S	G	L	N	E	A	.	Q	L	M	R	D	F	V	A	D	G	G	S	L	I	G	L	V	K	K
Query Conservation																																																						.
Alig confidence																																									.	.												.
Template Conservation																																									.	.
Template Sequence		P	K	A	Q	N	I	R	Q	G	A	K	E	P	Y	P	E	F	V	D	R	L	L	S	Q	I	K	S	E	G	H	P	Q	E	I	S	K	F	L	T	.	.	D	T	L	T	I	Q	N	A	N	E	E	C	R	N	A	M	R	H	L	R	P	E	D	T	L	E	E	K	M	Y	A
Template Known Secondary structure				S	T	T					T	T																	T	T											.	.							T	S		T	T	T	T	T	T	T	T	T			T	T	S
Template Predicted Secondary structure																																									.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.			.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions