Job Description P77213 Confidence 98.73% Date Thu Jan 5 12:26:23 GMT 2012 Rank 16 Aligned Residues 193 % Identity 20% Template c3o6xC_ PDB info PDB header:ligase Chain: C: PDB Molecule:glutamine synthetase; PDBTitle: crystal structure of the type iii glutamine synthetase from2 bacteroides fragilis Resolution 3.50 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.																	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.						.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Query Sequence		F	T	L	G	I	E	L	E	M	Q	V	V	N	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	D	L	S	Q	D	S	S	M	L	I	D	A	V	K	N	K	I	.	.	.	.	.	T	A	G	E	V	K	H	D	I	T	E	S	M	L	E	L	A	T	D	V	C	R	D	I	N
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.																					.
Template Conservation																																																																													.
Template Sequence		T	N	L	G	W	E	Q	E	Y	F	L	V	D	T	S	L	Y	N	A	R	P	D	L	R	L	T	G	R	T	L	M	G	H	S	I	P	P	R	V	T	A	F	M	K	E	L	E	I	E	C	H	K	L	G	I	P	V	K	T	R	H	N	E	V	A	P	N	Q	F	E	L	A	P	I	F	.	E	N	C	N
Template Known Secondary structure																				T		T	T					S	S		S																							T	T								B		S	S	T	T									.
Template Predicted Secondary structure																																																																													.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.		.	.	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		Q	A	A	G	Q	F	S	A	M	Q	K	V	V	L	Q	A	A	T	D	H	H	L	E	I	C	G	G	G	T	H	P	F	Q	K	W	Q	R	Q	E	V	C	D	N	E	R	Y	Q	R	T	L	E	N	F	G	Y	L	I	Q	Q	A	T	V	F	G	Q	H	V	H	V	G	C	A	S	G	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	N	D	H	N	Q	L	V	M	D	L	M	K	R	I	A	R	K	H	H	F	A	V	L	F	H	E	K	P	Y	N	G	V	N	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	H	N	N	W	S	L	C	T	D	T	G	I	N	L	F
Template Known Secondary structure																					T	T						S	S		S	S	T	T	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B									B	T	T				S	S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.																											340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
															145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.				.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																																										.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																																										.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	A	I	Y	L	L	H	G	L	S	R	F	V	P	H	F	I	A	L	S	A	A	S	P	Y	M	Q	G	T	D	T	R	F	A	S	S	R	P	N	I	F	S	A	F	P	D	N	G	P	M	P	W	V	S	N	W	.	.	.	Q	Q	F	E	A	L	F
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																																										.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.					.															.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.					.
Template Sequence		A	P	G	K	N	P	K	G	N	M	L	F	L	T	F	L	V	N	V	L	M	M	V	H	K	N	Q	D	L	L	R	A	S	I	M	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	S	H	.	R	L	G	A	N	E	A	P	P	A	I	L	S	I	F	L	G	S	Q	L	S	A	T	L
Template Known Secondary structure					S	S	T	T	T																		T								T				.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	.	T	S	S	B	T	T	B			S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.					.
Template SS confidence
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.															.	.	.	.		.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.				.	.	.	.	.	.	240	.	.	.	.	.	.	.			.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure																											.	.	.															.	.
Query SS confidence																											.	.	.															.	.
Query Sequence		R	C	L	S	Y	T	T	M	I	D	S	I	K	D	L	H	W	D	I	R	P	S	P	H	F	.	.	.	G	T	V	E	V	R	V	M	D	T	P	L	T	L	.	.	S	H	A	V	N	M	A	G	L	I	Q	A	T
Query Conservation																											.	.	.															.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.															.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	E	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	N	R	T	S	P	F	A	F	T	G	N	R	F	E	F	R	A	A	G	S	S	A	N	C	A	A	A	M	I	A	I	N	A	A	M	A	N	Q	L
Template Known Secondary structure			T		.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S	S	S		B		S	S	S				T	T	S	B	S	S	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		422	.	.															.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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