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Job DescriptionP77213
Confidence99.07%DateThu Jan 5 12:26:23 GMT 2012
Rank13Aligned Residues200
% Identity18%Templatec3ng0A_
PDB info PDB header:ligaseChain: A: PDB Molecule:glutamine synthetase; PDBTitle: crystal structure of glutamine synthetase from synechocystis sp. pcc2 6803
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20...... ...30.........40......
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Query Sequence  SEPFTLGIELEMQVVNPP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GYDLSQDSSMLIDAVKNKIT
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Template Sequence  ADTVYFGPEAEFFLFDDIRFGQTENSSYYFADSVEGRWNTGREEEGGNLGYKPGYKQGYFPVAPTDTAQDIRTEMLLTMA
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S
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TT
GGGTT


TT







TT

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TTT


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   124.....130.........140.........150.........160.........170.........180.........190.........200...
 
   47. .50...... ...60.........70.........80.........90.........100.........110.........120
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Query Sequence  AG. . . . . EVKHDITE. SMLELATDVCRDINQAAGQFSAMQKVVLQAATDHHLEICGGGTHPFQKWQRQEVCDNERYQRTL
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Template Sequence  AFGVPIEKHHHEVASGGQNELGIKF. DKLVNSADNLMIYKYVIKNVAKKYGKTVTFMPK. PIFNDNGS. . . . . . . . . . . .
Template Known Secondary structure  TT


SSTTT

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   204.....210.........220........ .230.........240.........250.........260. ........
 
   121........130.........140.... .....150.........160......... 170.........180.
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Query Sequence  ENFGYLIQQATVFGQHVHVGCASG. . . . . . . . . . . . . . DDAIYLLHGLSRFVPHFIALSAASP. . . . . YMQGTDTRFASS
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Template Sequence  . . . . . . . . . . . . . GMHVHQSLWKDGQPLFAGDKYAGFSQMGLWYIGGILKHAPALLAFTNPTTNSYKRLVPGFEAP. . . .
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TTTTBSSSGGGB
S
STTBBTTTB

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   270.........280.........290.........300.........310.........320.........330..
 
   182.......190.........200.........210.........220.........230.... .....240.........250......
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Query Sequence  RPNIFSAFPDNGPMPWVSNWQQFEALFRCLSYTTMIDSIKDLHWDIRPSPHFG. . . . . TVEVRVMDTPLTLSHAVNMAGL
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Template Sequence  VNLAYSQGNRSAS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VRIPLSGGNPKAKRLEFRCPDATSNPY. . LAFAAM
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   333......340..... ....350.........360.........370.. ......
 
   257..260.........270...
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Query Sequence  IQATAHWLLTERPFKHQ
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Template Sequence  LCAGIDGIKNQIDPGEP
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   379380.........390.....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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