Job Description P77213 Confidence 98.51% Date Thu Jan 5 12:26:23 GMT 2012 Rank 18 Aligned Residues 183 % Identity 21% Template c3fkyD_ PDB info PDB header:ligase Chain: D: PDB Molecule:glutamine synthetase; PDBTitle: crystal structure of the glutamine synthetase gln1deltan182 from the yeast saccharomyces cerevisiae Resolution 2.95 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.																													.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	T	L	G	I	E	L	E	M	Q	V	V	N	P	P	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	S	Q	D	S	S	M	L	I	D	A	V	K	N	K	I	T	A	G	E	V	K	H	D	I	T	E	S	M	L	E	L	A	T
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation																																																																		.	.
Template Sequence		I	W	F	G	L	E	Q	E	Y	T	L	F	D	M	Y	D	D	V	Y	G	W	P	K	G	G	Y	P	A	P	Q	G	P	Y	Y	C	G	V	G	A	G	K	V	Y	A	R	D	M	I	E	A	H	Y	R	A	C	L	Y	A	G	L	E	I	S	G	.	.	I	N	A	E	V	M	P	S	Q	W	E	F	Q	V
Template Known Secondary structure															T	T	S	S	B	T	T			T	T	S			S		S	S	S		T	T			S	T	T	T		S																T						.	.					S	S	T	T
Template Predicted Secondary structure																																																																		.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200	.	.	.
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		D	V	C	R	D	I	N	Q	A	A	G	Q	F	S	A	M	Q	K	V	V	L	Q	A	A	T	D	H	H	L	E	I	C	G	G	G	T	H	P	F	Q	K	W	Q	R	Q	E	V	C	D	N	E	R	Y	Q	R	T	L	E	N	F	G	Y	L	I	Q	Q	A	T	V	F	G	Q	H	V	H	V	G	C	.	.
Query Conservation																																																																																.	.
Alig confidence								.																						.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Conservation								.																						.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	P	C	T	G	I	.	D	M	G	D	Q	L	W	M	A	R	Y	F	L	H	R	V	A	E	E	F	G	.	.	.	I	K	I	S	F	H	P	K	P	L	K	G	D	W	N	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	C	H	A	N	V	S	T	K	E
Template Known Secondary structure						T		.																			T	T	T	.	.	.							S		S	S	S	S	S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B
Template Predicted Secondary structure								.																						.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		204	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230				.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.																							.	.	250	.	.	.	.	.	.	.
				142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	A	S	G	D	D	A	I	Y	L	L	H	G	L	S	R	F	V	P	H	F	I	A	L	S	A	A	S	P	Y	M	Q	G	T	D	T	R	F	A	S	S	R	P	N	I	F	S	A	F	P	D	N	G	P	M	P	W	V	S	N	W	Q	Q	F	E	A	L	F	R	C	L	S	Y	T	T	M	I	D	S
Query Conservation		.	.
Alig confidence		.	.																											.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	R	Q	P	G	G	T	K	Y	I	E	Q	A	I	E	K	L	S	K	R	H	A	E	H	I	K	L	Y	.	.	.	.	.	G	S	D	N	D	M	R	S	M	T	A	F	S	S	G	V	A	N	R	G	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S	S	S	T														T							S	S	.	.	.	.	.		T	T	G	G	G				S							S		T	T	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																														.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.						.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		220	.	.	.	.	.	.	.	.						.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure											.	.	.	.	.
Query SS confidence											.	.	.	.	.
Query Sequence		I	K	D	L	H	W	D	I	R	.	.	.	.	.	P	S	P	H	F	G	T	V	E	V	R	V	M	D	T	P	L	T	L	S	H	A	V	N	M	A	G	L	I	Q	A	T	A
Query Conservation											.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.			.	.	.	.	.																					.	.
Template Conservation		.	.	.	.	.	.	.																												.	.
Template Sequence		.	.	.	.	.	.	.	I	R	I	P	R	S	V	A	K	E	G	Y	G	Y	F	E	D	R	R	P	A	S	N	I	D	P	Y	.	.	L	V	T	G	I	M	C	E	T	V	C
Template Known Secondary structure		.	.	.	.	.	.	.											T										B	T	T					.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.																												.	.
Template SS confidence
									316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.			.	.	.	.	.	.	.	350	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions