Job Description P77213 Confidence 98.57% Date Thu Jan 5 12:26:23 GMT 2012 Rank 17 Aligned Residues 190 % Identity 15% Template c2d3aJ_ PDB info PDB header:ligase Chain: J: PDB Molecule:glutamine synthetase; PDBTitle: crystal structure of the maize glutamine synthetase2 complexed with adp and methionine sulfoximine phosphate Resolution 2.63 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.																											.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Query Sequence		F	T	L	G	I	E	L	E	M	Q	V	V	N	P	P	G	Y	D	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	D	S	S	M	L	I	D	A	V	K	.	N	K	I	T	A	G	E	V	K	H	D	I	T	E	S	M	L	E	L	A	T	D
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Conservation
Template Sequence		P	W	Y	G	I	E	Q	E	Y	T	L	L	Q	K	D	T	N	W	P	L	G	W	P	I	G	G	F	P	G	P	Q	G	P	Y	Y	C	G	I	G	A	E	K	S	F	G	R	D	I	V	D	A	H	Y	K	A	C	L	Y	A	G	I	N	I	S	G	I	N	G	E	V	M	P	G	Q	W	E	F	Q	V	G
Template Known Secondary structure															T	T	T			B	T	T	S		T	T	S			S		S	S	S		T	T			S	T	T	T																		T										S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	C	R	D	I	N	Q	A	A	G	Q	F	S	A	M	Q	K	V	V	L	Q	A	A	T	D	H	H	L	E	I	C	G	G	G	T	H	P	F	Q	K	W	Q	R	Q	E	V	C	D	N	E	R	Y	Q	R	T	L	E	N	F	G	Y	L	I	Q	Q	A	T	V	F	G	Q	H	V	H	V	G	C	A	S	G
Query Conservation
Alig confidence				.																									.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.																									.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	S	.	V	G	I	S	S	G	D	Q	V	W	V	A	R	Y	I	L	E	R	I	T	E	I	A	G	.	.	.	V	V	V	T	F	D	P	K	P	I	P	G	D	W	N	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	H	T	N	Y	S	T	E	S	M
Template Known Secondary structure				.		T																						T	.	.	.							S		S	S		S	S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B								T	T	T
Template Predicted Secondary structure				.																									.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		204	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.				230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.																							.	.	.	250	.	.	.	.	.	.	.
		145	.								.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.			170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.																								.	.
Query SS confidence				.	.	.	.	.	.	.																								.	.
Query Sequence		D	D	.	.	.	.	.	.	.	A	I	Y	L	L	H	G	L	S	R	F	V	P	H	F	I	A	L	S	A	A	S	P	.	.	Y	M	Q	G	T	D	T	R	F	A	S	S	R	P	N	I	F	S	A	F	P	D	N	G	P	M	P	W	V	S	N	W	Q	Q	F	E	A	L	F	R	C	L	S	Y	T	T
Query Conservation				.	.	.	.	.	.	.																								.	.
Alig confidence				.	.	.	.	.	.	.																								.	.													.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	K	E	G	G	Y	E	V	I	K	A	A	I	E	K	L	K	L	R	H	K	E	H	I	A	A	Y	G	E	G	N	E	R	R	L	T	G	R	H	E	T	A	D	I	N	T	.	.	F	S	W	G	V	A	N	R	G	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S	T	T															T						T	T	S		T	T						S	S	S	S	S				T	T		.	.					S	S		T	T	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.			.	.	.	.	.	.	310	.	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.						230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																.	.	.	.	.
Query SS confidence																.	.	.	.	.
Query Sequence		M	I	D	S	I	K	D	L	H	W	D	I	R	P	.	.	.	.	.	S	P	H	F	G	T	V	E	V	R	V	M	D	T	P	L	T	L	S	H	A	V	N	M	A	G	L	I	Q	A	T	A	H	W
Query Conservation																.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.																				.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																												.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	V	R	V	G	R	E	T	E	Q	N	G	K	G	Y	F	E	D	R	R	P	A	S	N	M	D	P	Y	.	.	V	V	T	S	M	I	A	E	T	T	I	V	W
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.										T	T										B	T	T					.	.											T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																												.	.
Template SS confidence
													315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.			.	.	.	.	.	.	.	.	350	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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