Job Description P77213 Confidence 98.99% Date Thu Jan 5 12:26:23 GMT 2012 Rank 14 Aligned Residues 200 % Identity 19% Template c1htoB_ PDB info PDB header:ligase Chain: B: PDB Molecule:glutamine synthetase; PDBTitle: crystallographic structure of a relaxed glutamine synthetase from2 mycobacterium tuberculosis Resolution 2.40 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.																																														.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	E	P	F	T	L	G	I	E	L	E	M	Q	V	V	N	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	Y	D	L	S	Q	D	S	S	M	L	I	D	A	V	K	N
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	D	T	A	Y	F	G	A	E	A	E	F	Y	I	F	D	S	V	S	F	D	S	R	A	N	G	S	F	Y	E	V	D	A	I	S	G	W	W	N	T	G	A	A	T	E	A	D	G	S	P	N	R	G	Y	K	V	R	H	K	G	G	Y	F	P	V	A	P	N	D	Q	Y	V	D	L	R	D	K	M	L	T
Template Known Secondary structure			S														S								S	S									T	T		G	G	G	T	T		S	B		T	T	S		B									S	S		S	S			T	T	T
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		44	.	.	.	.	.	50	.						.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.						.
Query SS confidence										.	.	.	.	.						.
Query Sequence		K	I	T	A	G	E	V	K	.	.	.	.	.	H	D	I	T	E	.	S	M	L	E	L	A	T	D	V	C	R	D	I	N	Q	A	A	G	Q	F	S	A	M	Q	K	V	V	L	Q	A	A	T	D	H	H	L	E	I	C	G	G	G	T	H	P	F	Q	K	W	Q	R	Q	E	V	C	D	N	E	R	Y	Q
Query Conservation										.	.	.	.	.						.
Alig confidence										.	.	.	.	.						.											.																																	.									.	.	.	.	.	.	.	.	.
Template Conservation																															.																																	.									.	.	.	.	.	.	.	.	.
Template Sequence		N	L	I	N	S	G	F	I	L	E	K	G	H	H	E	V	G	S	G	G	Q	A	E	I	N	Y	Q	F	N	.	S	L	L	H	A	A	D	D	M	Q	L	Y	K	Y	I	I	K	N	T	A	W	Q	N	G	K	T	V	T	F	M	P	K	.	P	L	F	G	D	N	G	S	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						T	T					T	T							T	T										.																							T	T							S		.	S	S	T	T	S				.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																															.																																	.									.	.	.	.	.	.	.	.	.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.																.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.						170	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Query Sequence		R	T	L	E	N	F	G	Y	L	I	Q	Q	A	T	V	F	G	Q	H	V	H	V	G	C	A	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	A	I	Y	L	L	H	G	L	S	R	F	V	P	H	F	I	A	L	S	A	A	S	P	.	.	.	.	.	Y	M	Q	G	T	D	T	R
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	M	H	C	H	Q	S	L	W	K	D	G	A	P	L	M	Y	D	E	T	G	Y	A	G	L	S	D	T	A	R	H	Y	I	G	G	L	L	H	H	A	P	S	L	L	A	F	T	N	P	T	V	N	S	Y	K	R	L	V	P	G	Y	E	A	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T			S	S	B		T	T	S	G	G	G	B																							S		S	T	T					S	S	S	S	S			S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.						230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure																																																						.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.
Query Sequence		F	A	S	S	R	P	N	I	F	S	A	F	P	D	N	G	P	M	P	W	V	S	N	W	Q	Q	F	E	A	L	F	R	C	L	S	Y	T	T	M	I	D	S	I	K	D	L	H	W	D	I	R	P	.	.	.	.	.	S	P	H	F	G	T	V	E	V	R	V	M	D	T	P	L	T	L	S	H	A	V	N
Query Conservation																																																						.	.	.	.	.
Alig confidence		.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.																				.	.
Template Conservation		.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.
Template Sequence		.	.	.	.	I	N	L	V	Y	S	Q	R	N	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	C	V	R	I	P	I	T	G	S	N	P	K	A	K	R	L	E	F	R	S	P	D	S	S	G	N	P	Y	.	.	L	A
Template Known Secondary structure		.	.	.	.							S	S		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T		G	G	G							S			S	S	S				.	.
Template Predicted Secondary structure		.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.
Template SS confidence
						330	.	.	.	.	.	.	.	.	.	340																																	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.			370	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	G	L	I	Q	A	T	A	H	W	L	L	T	E	R	P	F	K	H	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	S	A	M	L	M	A	G	L	D	G	I	K	N	K	I	E	P	Q	A	P
Template Known Secondary structure															T	T
Template Predicted Secondary structure
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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