Job Description P77213 Confidence 99.10% Date Thu Jan 5 12:26:23 GMT 2012 Rank 12 Aligned Residues 200 % Identity 19% Template c1fpyE_ PDB info PDB header:ligase Chain: E: PDB Molecule:glutamine synthetase; PDBTitle: crystal structure of glutamine synthetase from salmonella2 typhimurium with inhibitor phosphinothricin Resolution 2.89 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.																																											.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	E	P	F	T	L	G	I	E	L	E	M	Q	V	V	N	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	Y	D	L	S	Q	D	S	S	M	L	I	D	A	V	K	N	K	I	T
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	D	T	V	L	F	G	P	E	P	E	F	F	L	F	D	D	I	R	F	G	A	S	I	S	G	S	H	V	A	I	D	D	I	E	G	A	W	N	S	S	T	K	Y	E	G	G	N	K	G	H	R	P	G	V	K	G	G	Y	F	P	V	P	P	V	D	S	A	Q	D	I	R	S	E	M	C	L	V	M	E
Template Known Secondary structure			S														S								T	T									T	T		G	G	G	G	S				T	T									T	T	T		S	S			T	T	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		47	.						.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure				.	.	.	.	.									.
Query SS confidence				.	.	.	.	.									.
Query Sequence		A	G	.	.	.	.	.	E	V	K	H	D	I	T	E	.	S	M	L	E	L	A	T	D	V	C	R	D	I	N	Q	A	A	G	Q	F	S	A	M	Q	K	V	V	L	Q	A	A	T	D	H	H	L	E	I	C	G	G	G	T	H	P	F	Q	K	W	Q	R	Q	E	V	C	D	N	E	R	Y	Q	R	T	L
Query Conservation				.	.	.	.	.									.
Alig confidence				.	.	.	.	.									.										.																																		.									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.																																		.									.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	M	G	L	V	V	E	A	H	H	H	E	V	A	T	A	G	Q	N	E	V	A	T	R	F	.	N	T	M	T	K	K	A	D	E	I	Q	I	Y	K	Y	V	V	H	N	V	A	H	R	F	G	K	T	A	T	F	M	P	K	.	P	M	F	G	D	N	G	S	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	T										S	S	T	T	T									.																								T	T							S		.	S	S	S	S	S				.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																											.																																		.									.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.															.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.										170	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Query Sequence		E	N	F	G	Y	L	I	Q	Q	A	T	V	F	G	Q	H	V	H	V	G	C	A	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	A	I	Y	L	L	H	G	L	S	R	F	V	P	H	F	I	A	L	S	A	A	S	P	.	.	.	.	.	.	.	.	.	Y	M	Q	G	T	D	T	R
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	G	M	H	C	H	M	S	L	A	K	N	G	T	N	L	F	S	G	D	K	Y	A	G	L	S	E	Q	A	L	Y	Y	I	G	G	V	I	K	H	A	K	A	I	N	A	L	A	N	P	T	T	N	S	Y	K	R	L	V	P	G	Y	E	A	P	V	M	L	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.											T	T			T	T	B		S	S	G	G	G	B																							S		S	T	T					S	S	T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
															267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	S	S	R	P	N	I	F	S	A	F	P	D	N	G	P	M	P	W	V	S	N	W	Q	Q	F	E	A	L	F	R	C	L	S	Y	T	T	M	I	D	S	I	K	D	L	H	W	D	I	R	P	S	P	H	F	G	T	V	E	V	R	V	M	D	T	P	L	T	L	S	H	A	V	N	M	A	G	L	I
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.
Template Sequence		Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	R	N	R	S	A	S	I	R	I	P	V	V	A	S	P	K	A	R	R	I	E	V	R	F	P	D	P	A	A	N	P	Y	.	.	L	C	F	A	A	L	L
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S		T	T									S	S	S	T	T										T	T	S				.	.
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.
Template SS confidence
		334																																					.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.			.	370	.	.	.	.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	T	A	H	W	L	L	T	E	R	P	F	K	H	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	A	G	L	D	G	I	K	N	K	I	H	P	G	E	P
Template Known Secondary structure										T	T					S
Template Predicted Secondary structure
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions