Job Description P37194 Confidence 6.17% Date Thu Jan 5 11:55:00 GMT 2012 Rank 41 Aligned Residues 66 % Identity 9% Template c3stbC_ PDB info PDB header:rna binding protein/immune system Chain: C: PDB Molecule:rna-editing complex protein mp42; PDBTitle: a complex of two editosome proteins and two nanobodies Resolution 2.50 Å

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		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100			.	.	.	.	.	.	.			.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.						.	.								.	.		.																.
Query SS confidence																									.						.	.								.	.		.																.
Query Sequence		I	S	V	L	P	L	D	S	Y	A	K	P	D	I	E	A	N	Y	Q	G	R	L	L	.	A	R	Q	S	G	.	.	F	L	D	P	V	N	Y	.	.	R	.	N	H	F	V	T	I	L	G	T	I	Q	G	E	Q	P	.	G	F	I	N	K	V	P	Y	N	F	L	E	V	N	M
Query Conservation																									.						.	.								.	.		.																.
Alig confidence																									.						.	.								.	.		.																.
Template Conservation
Template Sequence		V	L	Q	F	T	L	I	T	D	F	E	G	P	S	P	G	D	P	D	K	D	F	H	T	V	R	V	F	D	S	D	Y	S	S	R	V	K	E	Q	L	R	D	G	E	W	F	L	V	T	G	R	L	R	M	V	P	Q	Y	D	G	S	M	R	K	Y	Y	H	Y	P	V	I	Q	V
Template Known Secondary structure												S	S			T	T	S		S										S													T	T																	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions