Return to main results Retrieve Phyre Job Id

Job DescriptionP28917
Confidence12.39%DateThu Jan 5 11:45:28 GMT 2012
Rank20Aligned Residues51
% Identity24%Templatec3r1iB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:short-chain type dehydrogenase/reductase; PDBTitle: crystal structure of a short-chain type dehydrogenase/reductase from2 mycobacterium marinum
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   158.160....... ..170.........180.........190.........200.........
Predicted Secondary structure 




..











Query SS confidence 









. .









































Query Sequence  LLNMLDIKGK. . IITTDAMGCQKDIAEKIQKQGGDYLFAVKGNQGRLNKAFEEK
Query Conservation 

  
 
 
 ..


 


  
  

  
   





 

 


 
   
   
Alig confidence 









..





















.


















Template Conservation        
 

 






 


 
 
  
   

. 


  
            
Template Sequence  VLDLFDLSGKRALITGASTGIGKKVALAYAEAGA. QVAVAARHSDALQVVADEI
Template Known Secondary structure  GGGGG

TT
SSTTSTT
.SSGGGG
Template Predicted Secondary structure 
















.

Template SS confidence 





















































   3......10.........20.........30...... ...40.........50.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions