Job Description P07012 Confidence 34.40% Date Thu Jan 5 10:59:58 GMT 2012 Rank 25 Aligned Residues 104 % Identity 13% Template c3lssA_ PDB info PDB header:ligase Chain: A: PDB Molecule:seryl-trna synthetase; PDBTitle: trypanosoma brucei seryl-trna synthetase in complex with atp Resolution 1.95 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		25	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.				.
Predicted Secondary structure												.	.																.																																																	.	.	.
Query SS confidence												.	.																.																																																	.	.	.
Query Sequence		L	D	Y	D	A	K	K	E	R	L	.	.	E	E	V	N	A	E	L	E	Q	P	D	V	W	N	E	.	P	E	R	A	Q	A	L	G	K	E	R	S	S	L	E	A	V	V	D	T	L	D	Q	M	K	Q	G	L	E	D	V	S	G	L	L	E	L	A	V	E	A	D	D	E	E	T	F	N	.	.	.	E
Query Conservation												.	.																.																																																	.	.	.
Alig confidence												.	.																.																																																	.	.	.
Template Conservation
Template Sequence		L	D	I	Q	L	F	R	D	E	T	G	A	N	I	I	R	E	S	Q	R	R	R	F	A	D	P	D	I	V	D	A	I	I	E	A	D	K	K	W	R	R	T	Q	F	L	T	E	A	S	K	K	L	I	N	I	C	S	K	A	V	G	A	K	K	K	A	K	E	A	C	V	L	Q	L	K	Q	L	S	K	D
Template Known Secondary structure				G	G	G	G	G	S														T	T			T	T																																							T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.							.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.
Query Sequence		A	V	A	E	L	D	A	L	E	E	K	L	A	Q	L	E	.	.	.	.	.	.	F	R	R	M	F	S	G	E	Y	D	S	A	D	C
Query Conservation																		.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.
Template Conservation
Template Sequence		L	S	D	Q	V	A	G	L	A	K	E	A	Q	Q	L	E	E	E	R	D	K	L	M	L	N	V	G	N	I	L	H	E	S	V	P	I
Template Known Secondary structure																									T	T							T	T	S
Template Predicted Secondary structure
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions