Job Description P07012 Confidence 100.00% Date Thu Jan 5 10:59:58 GMT 2012 Rank 2 Aligned Residues 347 % Identity 46% Template c2ihr1_ PDB info PDB header:translation Chain: 1: PDB Molecule:peptide chain release factor 2; PDBTitle: rf2 of thermus thermophilus Resolution 2.50 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	E	R	S	D	V	L	R	G	Y	L	D	Y	D	A	K	K	E	R	L	E	E	V	N	A	E	L	E	Q	P	D	V	W	N	E	P	E	R	A	Q	A	L	G	K	E	R	S	S	L	E	A	V	V	D	T	L	D	Q	M	K	Q	G	L	E	D	V	S	G	L	L	E	L	A	V	E	A	D	D	E
Query Conservation
Alig confidence																																																																											.	.	.	.
Template Conservation																																																																											.	.	.	.
Template Sequence		L	A	Q	R	L	E	G	L	G	G	I	F	D	I	P	Q	K	E	T	R	L	K	E	L	E	R	R	L	E	D	P	S	L	W	N	D	P	E	A	A	R	K	V	S	Q	E	A	A	R	L	R	R	T	V	D	T	F	R	S	L	E	S	D	L	Q	G	L	L	E	L	M	E	E	.	.	.	.	L	P	A
Template Known Secondary structure			T	T	T					T	T	S	S	S									T	T	T	T	T	S	T	T		G	G	G	T	T	T	G	G	G	S	S	S	T	T						T														T	T	T					T	T		.	.	.	.	S
Template Predicted Secondary structure																																																																											.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.					.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	F	N	E	A	V	A	E	L	D	A	L	E	E	K	L	A	Q	L	E	F	R	R	M	F	S	G	E	Y	D	S	A	D	C	Y	L	D	I	Q	A	G	S	G	G	T	E	A	Q	D	W	A	S	M	L	E	R	M	Y	L	R	W	A	E	S	R	G	F	K	T	E	I	I	E	E	S	E	G	E	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	R	E	A	L	K	P	E	L	E	E	A	A	K	K	L	D	E	L	Y	H	Q	T	L	L	N	F	P	H	A	E	K	N	A	I	L	T	I	Q	P	G	A	G	G	T	E	A	C	D	W	A	E	M	L	L	R	M	Y	T	R	F	A	E	R	Q	G	F	Q	V	E	V	V	D	L	T	P	G	P	E
Template Known Secondary structure		T	T	G	G	G	T	G	G	G	T																T		S	S	S	T	T	S										S	S	T																				T	T	T												S	S
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	I	K	S	V	T	I	K	I	S	G	D	Y	A	Y	G	W	L	R	T	E	T	G	V	H	R	L	V	R	K	S	P	F	D	S	G	G	R	R	H	T	S	F	S	S	A	F	V	Y	P	E	V	D	D	D	I	D	I	E	I	N	P	A	D	L	R	I	D	V	Y	R	T	S	G	A	G	G	Q	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	I	D	Y	A	Q	I	L	V	K	G	E	N	A	Y	G	L	L	S	P	E	A	G	V	H	R	L	V	R	P	S	P	F	D	A	S	G	R	R	H	T	S	F	A	G	V	E	V	I	P	E	V	D	E	E	V	E	V	V	L	K	P	E	E	L	R	I	D	V	M	R	A	S	G	P	G	G	Q	G
Template Known Secondary structure		S	S										S	T	T						G	G	G											T	T	S	S	S																		S	S	S	S					G	G	G											S	S			S
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	R	T	E	S	A	V	R	I	T	H	I	P	T	G	I	V	T	Q	C	Q	N	D	R	S	Q	H	K	N	K	D	Q	A	M	K	Q	M	K	A	K	L	Y	E	L	E	M	Q	K	K	N	A	E	K	Q	A	M	E	D	N	K	S	D	I	G	W	G	S	Q	I	R	S	Y	V	L	D	D	S	R	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	N	T	T	D	S	A	V	R	V	V	H	L	P	T	G	I	T	V	T	C	Q	T	T	R	S	Q	I	K	N	K	E	L	A	L	K	I	L	K	A	R	L	Y	E	L	E	R	K	K	R	E	E	E	L	K	A	L	R	G	E	V	R	P	I	E	W	G	S	Q	I	R	S	Y	V	L	D	K	N	Y	V
Template Known Secondary structure		G	G	G	S		S							T	T	T	T							S	S	S																													T	T	T	T	T			S			S				S		S					G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	L	R	T	G	V	E	T	R	N	T	Q	A	V	L	D	G	S	L	D	Q	F	I	E	A	S	L	K	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	D	H	R	T	G	L	M	R	H	D	P	E	N	V	L	D	G	D	L	M	D	L	I	W	A	G	L	E	W	K
Template Known Secondary structure				T	T	T					S						T	T	T
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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