Job Description P07012 Confidence 18.16% Date Thu Jan 5 10:59:58 GMT 2012 Rank 52 Aligned Residues 85 % Identity 19% Template c2c5iT_ PDB info PDB header:protein transport Chain: T: PDB Molecule:t-snare affecting a late golgi compartment PDBTitle: n-terminal domain of tlg1 complexed with n-terminus of2 vps51 in distorted conformation Resolution 2.3 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	N	N	R	I	Q	D	L	T	E	R	S	D	V	L	R	G	Y	L	D	Y	D	A	K	K	E	R	L	E	E	V	N	A	E	L	E	Q	P	D	V	W	N	E	P	E	R	A	Q	A	L	G	K	E	R	S	S	L	E	A	V	V	D	T	L	D	Q	M	K	Q	G	L	E	D	V	S	G	L	L	E
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.									.	.						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.									.	.						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	F	Q	Q	V	V	K	D	T	K	E	Q	L	N	R	I	N	N	Y	I	.	.	.	.	.	.	.	.	.	.	.	.	T	R	H	N	T	A	G	D	.	.	D	D	Q	E	E	.	.	.	.	.	.	.	.	.	.	.	.	E	I	Q	D	I	L	K	D	V	E	E	T	I	V	D	L	D	R	S	I	I
Template Known Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.			T		S				.	.						.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.									.	.						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.													.	.	.	30	.	.	.	.			.	.	.	.	.													40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	V	E	A	D	D	E	E	T	F	N	E	A	V	A	E	L	D	A	L	E	E	K	L	A	Q	L	E	F	R	R
Query Conservation
Alig confidence								.
Template Conservation								.
Template Sequence		V	X	K	R	D	E	.	N	E	D	V	S	G	R	E	A	Q	V	K	N	I	K	Q	Q	L	D	A	L	K	L	R	F
Template Known Secondary structure			T	T	T		S	.	S
Template Predicted Secondary structure								.
Template SS confidence
		61	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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