Job Description P07012 Confidence 29.05% Date Thu Jan 5 10:59:58 GMT 2012 Rank 31 Aligned Residues 109 % Identity 21% Template c1wleB_ PDB info PDB header:ligase Chain: B: PDB Molecule:seryl-trna synthetase; PDBTitle: crystal structure of mammalian mitochondrial seryl-trna2 synthetase complexed with seryl-adenylate Resolution 1.65 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	D	Y	D	A	K	K	E	R	L	E	E	V	N	A	E	L	E	Q	P	D	V	W	N	E	P	E	R	A	Q	A	L	G	K	E	R	S	S	L	E	A	V	V	D	T	L	D	Q	M	K	Q	G	L	E	D	V	S	G	L	L	E	L	A	V	E	A	D	D	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	D	M	E	S	L	C	A	Y	P	E	D	A	A	R	A	L	D	L	R	K	G	E	L	R	S	K	D	L	P	G	I	I	S	T	W	Q	E	L	R	Q	L	R	E	Q	I	R	S	L	E	E	E	K	E	A	V	T	E	A	V	R	A	L	V	V	N	Q	D	N	S	Q	V	Q	Q	D	P	Q	Y	Q	S
Template Known Secondary structure										S												T		S			G	G	G																													T					T	S	S	S	S	S	T	T	T	T	G	G	G	S	T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
			93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.															.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure		.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	E	E	T	F	N	E	A	V	A	E	L	D	A	L	E	E	K	L	A	Q	L	E	F	R	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	F	S	G	E	Y	D	S	A	D	C	Y	L	D	I	Q	A
Query Conservation		.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.					.
Template Conservation																																														.
Template Sequence		L	R	A	R	G	R	E	I	R	K	Q	L	T	L	L	Y	P	K	E	A	Q	L	E	E	Q	F	Y	L	R	A	L	R	L	P	N	Q	T	H	P	D	V	P	V	G	.	D	E	S	Q	A	R	V	L	H	V	V	G
Template Known Secondary structure		S	S	T	T	T																										T	T	S						T	T				S	.	S	G	G	G								S
Template Predicted Secondary structure																																														.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions