Job Description P07012 Confidence 24.96% Date Thu Jan 5 10:59:58 GMT 2012 Rank 36 Aligned Residues 108 % Identity 15% Template c1sryB_ PDB info PDB header:ligase(synthetase) Chain: B: PDB Molecule:seryl-trna synthetase; PDBTitle: refined crystal structure of the seryl-trna synthetase from2 thermus thermophilus at 2.5 angstroms resolution Resolution 2.50 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	Y	D	A	K	K	E	R	L	E	E	V	N	A	E	L	E	Q	P	D	V	W	N	E	P	E	R	A	Q	A	L	G	K	E	R	S	S	L	E	A	V	V	D	T	L	D	Q	M	K	Q	G	L	E	D	V	S	G	L	L	E	L	A	V	E	A	D	D	E	E	T	F	N	E	A	V	A	E	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	L	K	R	L	R	Q	E	P	E	V	F	H	R	A	I	R	E	K	G	V	A	L	D	L	E	A	L	L	A	L	D	R	E	V	Q	E	L	K	K	R	L	Q	E	V	Q	T	E	R	N	Q	V	A	K	R	V	P	K	A	P	P	E	E	K	E	A	L	I	A	R	G	K	A	L	G	E	E	A	K
Template Known Secondary structure																					T	T																																			T	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		105	.	.	.	.	110	.	.	.	.	.	.	.															.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	E	E	K	L	A	Q	L	E	F	R	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	F	S	G	E	Y	D	S	A	D	C	Y	L	D	I
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	L	E	E	A	L	R	E	K	E	A	R	L	E	A	L	L	L	Q	V	P	L	P	P	W	P	G	A	P	V	G	G	E	E	A	N	R	E	I	K	R	V
Template Known Secondary structure																			T	T							T	T	S		S	S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions