Job Description P07012 Confidence 18.55% Date Thu Jan 5 10:59:58 GMT 2012 Rank 50 Aligned Residues 88 % Identity 13% Template c1s35A_ PDB info PDB header:structural protein Chain: A: PDB Molecule:spectrin beta chain, erythrocyte; PDBTitle: crystal structure of repeats 8 and 9 of human erythroid2 spectrin Resolution 2.40 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Y	D	A	K	K	E	R	L	E	E	V	N	A	E	L	E	Q	P	D	V	W	N	E	P	E	R	A	Q	A	L	G	K	E	R	S	S	L	E	A	V	V	D	T	L	D	Q	M	K	Q	G	L	E	D	V	S	G	L	L	E	L	A	V	E	A	D	D	E	E	T	F	N	E	A	V	A	E	L	D	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	D	D	F	Q	A	W	L	S	I	T	Q	K	A	V	A	S	E	D	M	P	E	S	L	P	E	A	E	Q	L	L	Q	Q	H	A	G	I	K	D	E	I	D	G	H	Q	D	S	Y	Q	R	V	K	E	S	G	E	K	V	I	Q	G	Q	T	D	P	E	Y	L	L	L	G	Q	R	L	E	G	L	D	T
Template Known Secondary structure																								S	S																																					T	T			S
Template Predicted Secondary structure
Template SS confidence
		1069	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.
		106	.	.	.	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	E	K	L	A	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	W	D	A	L	G	R	M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1149	1150	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions