Return to main results Retrieve Phyre Job Id

Job DescriptionP18473
Confidence27.32%DateThu Jan 5 11:37:03 GMT 2012
Rank159Aligned Residues101
% Identity15%Templatec3gndC_
PDB info PDB header:lyaseChain: C: PDB Molecule:aldolase lsrf; PDBTitle: crystal structure of e. coli lsrf in complex with ribulose-5-phosphate
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   91........100...... ...110.........120.........130.........140.........150.. .......160.....
Predicted Secondary structure 




...















..




Query SS confidence 















. . .













































. .












Query Sequence  GALYFVSFSIPEEGLK. . . RMLGETRHFGIPATLRGMVNNDLKTTAEAVLSLVKDGATDGVQIDP. . TLFSQYGIRTVPA
Query Conservation     



 


   
 ... 
   
   
   



        
   
  
        
 


.. 

  
 
  


Alig confidence 















...





















.






















..






.




Template Conservation   
    
   
   
     
   
   




 
     
. 
 
  




 




 

          

.     
Template Sequence  AAQVYIGSEYEHQSIKNIIQLVDAGMKVGMPTMAVTGVVRD. QRYFSLATRIAAEMGAQIIKTYYVEKGFERIV. AGCPV
Template Known Secondary structure 
TTSTTT






.T
S


TTT.T
SS
Template Predicted Secondary structure 













.






.


Template SS confidence 















































































   139140.........150.........160.........170......... 180.........190.........200.........210. .....
 
   166...170... ......180.........190...
Predicted Secondary structure 



.........................................


Query SS confidence 







. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .



















Query Sequence  LVVFCSQG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . YDIIRGNLRVGQALEKVAAT
Query Conservation   
      ......................................... 
 
 
 


  


  
  
Alig confidence 







.........................................



















Template Conservation 






   
    
     

 


 







 
  

     

  


      

       
Template Sequence  PIVIAGGKKLPEREALEMCWQAIDQGASGVDMGRNIFQSDHPVAMMKAVQAVVHHNETADRAYELYLSE
Template Known Secondary structure 


S


TT

STSS
S



Template Predicted Secondary structure 
























Template SS confidence 




































































   221........230.........240.........250.........260.........270.........280.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions