 |
Job Description | P18473 | Confidence | 83.37% | Date | Thu Jan 5 11:37:03 GMT 2012 |
Rank | 51 | Aligned Residues | 92 |
% Identity | 13% | Template | c3d22A_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:thioredoxin h-type; |
PDBTitle: crystal structure of a poplar thioredoxin h mutant,2 pttrxh4c61s
|
Resolution | 1.60 Å |
|
 |
  |   |
102 | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | |
|
. | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
| . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . |
|  |  |  |
|  |  |  |  |  |  |
|
|
|  |  |
|
|  |  |  |  |  |
|
|
|
| . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Query Sequence |   |
E | E | G | L | K | R | M | L | G | E | T | R | H | F | G | I | P | A | T | L | R | G | M | V | N | . |
. |
N | D | L | K | T | T | A | E | A | V | L | S | L | V | K | D | G | A | T | D | . |
. |
. |
. |
. |
G | V | Q | I | D | P | T | L | F | S | Q | Y | G | I | R | T | V | P | A | L | V | V | F | C | S | Q | G | . |
Query Conservation |   |
  |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|
|
|
|   |   |   | . | . |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   | . | . | . | . | . |   |
|   |
|
|
|   |
|
|   |   |
|   |
|   |   |
|
|
|   |
|   |   |   |   |   |   | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |
|
|
|   |
|   |
|   |
|
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|   |   |   |   |
|   |   |
Template Sequence |   |
K | E | R | W | D | Q | K | L | S | E | A | S | R | D | G | K | I | V | L | A | N | F | S | A | R | W | C | G | P | S | R | Q | I | A | P | Y | Y | I | E | L | S | E | N | Y | P | S | L | M | F | L | V | I | D | V | D | E | L | S | D | F | S | A | S | W | E | I | K | A | T | P | T | F | F | F | L | R | D | G | Q | Q |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S |  |  |  |  |  |  | T | T | T | S |  |  |  |  |  |  | T | T |
|
|  |  | S |  |  |  |  |  |  | T | T |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
32 | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . |
  |
  |   |
174 | . | . | . | . | . | 180 | |
|
. | . | . | . | . | . | . | . | . | 190 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  | . | . |
|
|  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | D | I | I | R | G | N | . |
. |
L | R | V | G | Q | A | L | E | K | V | A | A | T |
Query Conservation |   |
  |
|   |
|   |
|   | . | . |
|
|
|   |   |
|
|
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |
|   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
Template Sequence |   |
V | D | K | L | V | G | A | N | K | P | E | L | H | K | K | I | T | A | I | L | D | S |
Template Known Secondary structure |   |
 |  |  |  |  | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
112 | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|