Job Description P31462 Confidence 100.00% Date Thu Jan 5 11:47:51 GMT 2012 Rank 2 Aligned Residues 387 % Identity 14% Template d1pw4a_ SCOP info MFS general substrate transporter MFS general substrate transporter Glycerol-3-phosphate transporter Resolution 3.30

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	L	I	C	S	F	A	L	V	L	L	Y	P	A	G	I	D	M	Y	L	V	G	L	P	R	I	A	A	D	L	N	A	S	E	A	Q	L	H	I	A	F	S	V	Y	L	A	G	M	A	A	A	M	L	F	A	G	K	V	A	D	R	S	G	R	K	P	V	A	I	P	G	A	A	L	F	I	I	A	S
Query Conservation
Alig confidence																														.
Template Conservation																														.
Template Sequence		Q	I	F	L	G	I	F	F	G	Y	A	A	Y	Y	L	V	R	K	N	F	A	L	A	M	P	Y	L	V	.	E	Q	G	F	S	R	G	D	L	G	F	A	L	S	G	I	S	I	A	Y	G	F	S	K	F	I	M	G	S	V	S	D	R	S	N	P	R	V	F	L	P	A	G	L	I	L	A	A	A	V	M
Template Known Secondary structure																			T	S								T	T	.	S	S	T	T		S	S																											S
Template Predicted Secondary structure																														.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		83	.	.					.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.
Query SS confidence					.	.	.	.
Query Sequence		V	F	C	.	.	.	.	S	L	A	E	T	S	T	L	F	L	A	G	R	F	L	Q	G	L	G	A	G	C	C	Y	V	V	A	F	A	I	L	R	D	T	L	D	D	R	R	R	A	K	V	L	S	L	L	N	G	I	T	C	I	I	P	V	L	A	P	V	L	G	H	L	I	M	L	K	F	P	W	Q	S
Query Conservation					.	.	.	.
Alig confidence					.	.	.	.
Template Conservation
Template Sequence		L	F	M	G	F	V	P	W	A	T	S	S	I	A	V	M	F	V	L	L	F	L	C	G	W	F	Q	G	M	G	W	P	P	C	G	R	T	M	V	H	W	W	S	Q	K	E	R	G	G	I	V	S	V	W	N	C	A	H	N	V	G	G	G	I	P	P	L	L	F	L	L	G	M	A	W	F	N	D	W	H
Template Known Secondary structure												S	S	S	S																T										T	T		T	T	T																		T	S												T			S	T
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.										.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.
Query Sequence		L	F	W	A	M	A	M	M	G	I	A	V	L	M	L	S	L	F	I	L	K	E	T	R	P	A	A	P	A	A	S	D	K	P	R	E	N	S	E	S	.	.	.	.	.	.	.	.	.	L	L	N	R	F	F	L	S	R	V	V	I	T	T	L	S	V	S	V	I	L	T	F	V	N	T	S	P	V	L	L
Query Conservation																																										.	.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	L	Y	M	P	A	F	C	A	I	L	V	A	L	F	A	F	A	M	M	R	D	T	P	Q	S	C	G	L	P	P	I	E	E	Y	K	N	D	T	A	K	Q	I	F	M	Q	Y	V	L	P	N	K	L	L	W	Y	I	A	I	A	N	V	F	V	Y	L	L	R	Y	G	I	L	D	W	S	P	T	Y	L
Template Known Secondary structure		T		T																					S	S	T	T	T				S		T	T	T						T							T	S	S																													B
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.						.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.
Query Sequence		M	E	I	M	G	F	E	R	G	E	Y	A	T	I	M	A	L	T	A	G	V	S	M	T	V	S	F	S	T	P	F	A	L	G	I	F	K	P	R	T	L	M	I	T	S	Q	V	L	F	L	A	A	G	I	T	L	A	V	S	.	.	.	.	.	P	S	H	A	V	S	L	F	G	I	T	L	I	C	A	G
Query Conservation																																																													.	.	.	.	.
Alig confidence																																																													.	.	.	.	.
Template Conservation
Template Sequence		K	E	V	K	H	F	A	L	D	K	S	S	W	A	Y	F	L	Y	E	Y	A	G	I	P	G	T	L	L	C	G	W	M	S	D	K	V	F	R	G	N	R	G	A	T	G	V	F	F	M	T	L	V	T	I	A	T	I	V	Y	W	M	N	P	A	G	N	P	T	V	D	M	I	C	M	I	V	I	G	F	L
Template Known Secondary structure		T	T	B	S																																T	S	T	T																				T	T	S			T	T
Template Predicted Secondary structure
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.		.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure																			.																	.
Query SS confidence																			.																	.
Query Sequence		F	S	V	G	F	G	V	A	M	S	Q	A	L	G	P	F	S	.	L	R	A	G	V	A	S	S	T	L	G	I	A	Q	V	C	.	G	S	S	L	W	I	W	L	A	A	V	V	G	I	G	A	W	N	M	L	I	G	I	L	I	A	C	S	I	V	S	L	L	L	I	M	F	V	A	P	G	R	P	V	A
Query Conservation																			.																	.
Alig confidence																			.																	.
Template Conservation
Template Sequence		I	Y	G	P	V	M	L	I	G	L	H	A	L	E	L	A	P	K	K	A	A	G	T	A	A	G	F	T	G	L	F	G	Y	L	G	G	S	V	A	A	S	A	I	V	G	Y	T	V	D	F	F	G	W	D	G	G	F	M	V	M	I	G	G	S	I	L	A	V	I	L	L	I	V	V	M	I	G	E	K	R
Template Known Secondary structure			T													T	S		T	T																															S	S		S
Template Predicted Secondary structure
Template SS confidence
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440
		383	.	.	.	.	.	.	390
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	E	E	I	H	H	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	H	E	Q	L	L	Q	E
Template Known Secondary structure					G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		441	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions