Job Description P06627 Confidence 14.25% Date Thu Jan 5 10:59:18 GMT 2012 Rank 9 Aligned Residues 49 % Identity 4% Template c3pt2A_ PDB info PDB header:hydrolase/protein binding Chain: A: PDB Molecule:rna polymerase; PDBTitle: structure of a viral otu domain protease bound to ubiquitin Resolution 2.50 Å

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.						.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.
Query SS confidence																				.	.	.	.	.
Query Sequence		Y	L	T	M	R	L	D	D	E	T	N	Q	L	L	I	A	A	K	.	.	.	.	.	N	R	S	G	W	C	K	T	D	E	A	A	D	R	V	I	D	H	L	I	K	F	P	D	F	Y	N	S	E	I	F
Query Conservation																				.	.	.	.	.
Alig confidence																				.	.	.	.	.
Template Conservation
Template Sequence		Y	F	E	I	V	R	Q	P	G	D	G	N	C	F	Y	H	S	I	A	E	L	T	X	P	N	K	T	D	H	S	Y	H	Y	I	K	R	L	T	E	S	A	A	R	K	Y	Y	Q	E	E	P	E	A	R	L
Template Known Secondary structure		T								S	S	T	T											S	S	S			T	T	T																G	G	G		T	T
Template Predicted Secondary structure
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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