 |
Job Description | P06627 | Confidence | 2.15% | Date | Thu Jan 5 10:59:18 GMT 2012 |
Rank | 84 | Aligned Residues | 31 |
% Identity | 26% | Template | c2gidP_ |
PDB info |
PDB header:translation | Chain: P: PDB Molecule:mitochondrial rna-binding protein 2; |
PDBTitle: crystal structures of trypanosoma bruciei mrp1/mrp2
|
Resolution | 3.35 Å |
|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | M | V | K | L | K | L | P | V | D | V | E | S | L | L | I | E | A | S | N | R | S | G | R | S | R | S | F | E | A | V | I | R |
Query Conservation |   |
  |   |
|   |
|   |
|
|   |
|
|   |   |
|
|   |   |
|   |   |
|
|
|
|
|
|   |   |
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |
|
|   |
|
|   |
|
|
|
|   |
|
|
| . | . |
|
|   |
|
|
|
|
|
|
|
|
Template Sequence |   |
R | V | V | S | V | X | L | P | A | V | Y | T | A | R | F | L | A | V | L | E | . |
. |
G | R | S | E | K | V | E | V | H | S | R |
Template Known Secondary structure |   |
|
|
|
|
|
|
|
| T |  |  |  |  |  |  |  |  |  |  | T | . | . | T | S |
| S |
| B |
|
| B |
| S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | |
|
140 | . | . | . | . | . | . | . | . | . | 150 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|