Job Description P06627 Confidence 2.28% Date Thu Jan 5 10:59:18 GMT 2012 Rank 68 Aligned Residues 61 % Identity 15% Template c1y9jA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:sec1 family domain containing protein 1; PDBTitle: solution structure of the rat sly1 n-terminal domain Resolution UNK

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		1	.	.	.	.	.	.	.	.	10	.	.						.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure														.	.	.	.	.
Query SS confidence														.	.	.	.	.
Query Sequence		M	K	R	F	G	T	R	S	A	T	G	K	.	.	.	.	.	M	V	K	L	K	L	P	V	D	V	E	S	L	L	I	E	A	S	N	R	S	G	R	S	R	S	F	E	A	V	I	R	L	K	D	H	L	H	R	Y	P	K	F	N	R	A	G	N	I	Y	G
Query Conservation														.	.	.	.	.
Alig confidence														.	.	.	.	.																		.																									.
Template Conservation																																				.																									.
Template Sequence		M	L	N	F	N	V	P	H	V	K	N	S	P	G	E	P	V	W	K	V	L	I	Y	D	R	F	G	Q	D	I	I	S	P	L	.	L	S	V	K	E	L	R	D	M	G	I	T	L	H	L	L	L	H	S	D	R	D	P	I	.	R	D	V	P	A	V	Y	F
Template Known Secondary structure			T	T				S				S	S	S	S																		T	T	T	.										T							T	T	S					B	.	T	T	S
Template Predicted Secondary structure																																				.																									.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions