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Job DescriptionP75746
Confidence79.88%DateThu Jan 5 12:13:43 GMT 2012
Rank9Aligned Residues177
% Identity17%Templatec1w17A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:probable polysaccharide deacetylase pdaa; PDBTitle: structure of bacillus subtilis pdaa, a family 42 carbohydrate esterase.
Resolution1.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40. ........50.........60.........70.........
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Query Sequence  KIDLNADLGEGCASDAELLTLVSSANIACGFHAGDAQIMQ. . ACVREAIKNGVAIGAHPSFPDRENFGRSAMQLPPETVY
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Template Sequence  TIYLTFDNGYENGYTPKVLDVLKKHRVTGTFFVTGHFVKDQPQLIKRMSDEGHIIGNH. SFHH. . . . . PDLTTKTADQIQ
Template Known Secondary structure  SS

S
TT




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   67..70.........80.........90.........100.........110.........120.... .... .130.........140
 
   80.........90.........100.........110.........120.........130...... ...140.........150......
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Query Sequence  AQTLYQIGALATIARAQGGVMRHVKPHGMLYNQAAKEAQLADAIARAVYACDPALIL. . . VGLAGSELIRAGKQYGLTTR
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Template Sequence  DELDSVNEEVYKITGK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QDNLYLRPPRGVFSEYVLKETKRLGYQTV
Template Known Secondary structure  S
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GGG
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   141........150...... ...160.........170.........180.....
 
   157..160.........170.........180.........190.........200.........210.........220.........230......
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Query Sequence  EEVFADRGYQADGSLVPRSQSGALIENEEQALAQTLEMVQHGRVKSITGEWATVAAQTVCLHGDGEHALAFARRLRSAFA
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Template Sequence  . . . . . . . . . . . FWSVAFVDWKINNQKGKKYAYDHMIKQAHPGAI. . . . . . . . . . . . . . YLLHTVSRDNAEALDDAITDLK
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SB

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   186...190.........200.........210........ .220.........230.........240
 
   237..240....
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Query Sequence  EKGIVVAA
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Template Sequence  KQGYTFKS
Template Known Secondary structure  TT

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   241.......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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