Return to main results Retrieve Phyre Job Id

Job DescriptionQ47719
Confidence13.84%DateThu Jan 5 12:37:11 GMT 2012
Rank48Aligned Residues60
% Identity18%Templatec3aerB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:light-independent protochlorophyllide reductase subunit b; PDBTitle: structure of the light-independent protochlorophyllide reductase2 catalyzing a key reduction for greening in the dark
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3940.........50.........60.........70. ........80.........90.........
Predicted Secondary structure 









.......













Query SS confidence 
































. . . . . . .



























Query Sequence  VAVAGDHPAAVQVTMTLVNDTGFDPVFSGSIAE. . . . . . . SWRQQPCTPSYCCDWEAATMLRAFPLAK
Query Conservation 






 


  

 

  








 


.......


 




 

 
     
  

  
 
Alig confidence 
































.......













.












Template Conservation 
 
         
   
  


  

                            .
  

   
    
Template Sequence  VFIFGDGTHVIAAARIAAKEVGFEVVGMGCYNREMARPLRTAAAEYGLEALITD. DYLEVEKAIEAAA
Template Known Secondary structure 
SSTT

S
GGGTTT



S.

Template Predicted Secondary structure 















.


Template SS confidence 



































































   283......290.........300.........310.........320.........330...... ...340.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions