Return to main results Retrieve Phyre Job Id

Job DescriptionP55798
Confidence63.77%DateThu Jan 5 12:06:12 GMT 2012
Rank67Aligned Residues71
% Identity15%Templated1gg4a1
SCOP infoMurD-like peptide ligases, peptide-binding domain MurD-like peptide ligases, peptide-binding domain MurCDEF C-terminal domain
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  VYQRIAGHQWRHIWLSGD. IHGCLEQLRRKLWHCRFDPWRDLLISVGDVIDRGPQSLRCLQLLEQ. . . . . . HWVCAVRGN
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Template Sequence  RLFPIQLAENQLL. . LDDSYNANVGSXTAAVQVLAEXPG. YRVLVVGDXAELGAESEACHVQVGEAAKAAGIDRVLSVGK
Template Known Secondary structure  SSTT..

S


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   316...320........ .330.........340.........350.. .......360.........370.........380.........390..
 
   80
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Query Sequence  H
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Template Conservation   
Template Sequence  Q
Template Known Secondary structure  S
Template Predicted Secondary structure 
Template SS confidence 
   393
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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