Job Description P55798 Confidence 98.23% Date Thu Jan 5 12:06:12 GMT 2012 Rank 56 Aligned Residues 171 % Identity 17% Template c3zu0A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:nad nucleotidase; PDBTitle: structure of haemophilus influenzae nad nucleotidase (nadn) Resolution 2.00 Å

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		18	.	20	.	.	.	.	.	.	.	.																						.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.						.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.
Query Sequence		H	I	W	L	S	G	D	I	H	G	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	Q	L	R	R	K	L	W	H	C	R	F	D	P	W	R	D	L	L	I	S	V	G	D	V	I	D	R	G	P	Q	S	.	.	.	.	.	L	R	C	L	Q	L	L	E	Q	H
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.
Template Conservation
Template Sequence		S	I	L	H	I	N	D	H	H	S	Y	L	E	P	H	E	T	R	I	N	L	N	G	Q	Q	T	K	V	D	I	G	G	F	S	A	V	N	A	K	L	N	K	L	R	K	K	Y	K	N	P	L	V	L	H	A	G	D	A	I	T	G	T	L	Y	F	T	L	F	G	G	S	A	D	A	A	V	M	N	A	G
Template Known Secondary structure										T	T			S									T	T																								S	S	S							S			S		S	S					T	T	T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		72	.		.	.	.	.	.	.	80	.						.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.																																									100	.	.	.	.	.
Predicted Secondary structure				.									.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.									.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	V	.	C	A	V	R	G	N	H	E	.	.	.	.	.	Q	M	A	M	D	A	L	A	S	Q	Q	M	S	L	W	L	M	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	D	W	F	I
Query Conservation				.									.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.									.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	F	H	Y	F	T	L	G	N	H	E	F	D	A	G	N	E	G	L	L	K	L	L	E	P	L	K	I	P	V	L	S	A	N	V	I	P	D	K	S	S	I	L	Y	N	K	W	K	P	Y	D	I	F	T	V	D	G	E	K	I	A	I	I	G	L	D	T	V	N	K	T	V	N	S	S	S	P	G	K	D
Template Known Secondary structure		T		S						S	G	G	G	T	T										T	T			S					S	S					T	T	S	T	T	T	T	S		B	S							T	T											S							S				T	T
Template Predicted Secondary structure
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	A	D	N	Q	Q	K	Q	A	K	T	A	L	E	K	C	Q	H	L	P	F	I	L	E	V	H	S	R	T	G	K	H	V	I	A	H	A	D	Y	P	D	D	V	Y	E	W	Q	K	D	V	D	L	H	Q	V	L	W	S	R	S	R	L	G	E	R	Q	K	G	Q	G	I	T	G	A	D	H	F	W	F
Query Conservation
Alig confidence																								.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	K	F	Y	D	E	I	A	T	A	Q	I	M	A	N	A	L	K	Q	Q	G	I	.	.	.	.	.	.	.	N	K	I	I	L	L	S	H	A	G	S	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	N	I	E	I	A	Q	K	V	N	D	I	D	V	I	V	T
Template Known Secondary structure																				T	T	T		.	.	.	.	.	.	.									T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										S	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.								220	.	.	.	.	.	.	.	.	.	230	.																							.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		186	.	.	.	190	.	.	.	.	.	.																						.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	H	T	P	L	R	H	R	V	D	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	L	H	Y	I	D	T	G	A	V	F	G	G	E	L	T	L	V	Q	L	Q
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation																																											.
Template Sequence		G	D	S	H	Y	L	Y	G	N	D	E	L	R	S	L	K	L	P	V	I	Y	E	Y	P	L	E	F	K	N	P	N	G	E	P	V	F	V	M	E	G	W	.	A	Y	S	A	V	V	G	D	L	G	V	K
Template Known Secondary structure			S	S												T	T							S	S						T	T	S										.	S	T	T
Template Predicted Secondary structure																																											.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions