Job Description P55798 Confidence 95.23% Date Thu Jan 5 12:06:12 GMT 2012 Rank 63 Aligned Residues 198 % Identity 15% Template c3e0jG_ PDB info PDB header:transferase Chain: G: PDB Molecule:dna polymerase subunit delta-2; PDBTitle: x-ray structure of the complex of regulatory subunits of2 human dna polymerase delta Resolution 3.00 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.						.	.	30	.	.	.	.	.	.	.	.	.											40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																									.		.	.	.	.	.													.	.	.	.	.	.	.	.	.	.																												.
Query SS confidence																									.		.	.	.	.	.													.	.	.	.	.	.	.	.	.	.																												.
Query Sequence		P	A	P	V	Y	Q	R	I	A	G	H	Q	W	R	H	I	W	L	S	G	D	I	H	.	G	.	.	.	.	.	C	L	E	Q	L	R	R	K	L	W	H	C	.	.	.	.	.	.	.	.	.	.	R	F	D	P	W	R	D	L	L	I	S	V	G	D	V	I	D	R	G	P	Q	S	L	R	C	L	Q	.
Query Conservation																									.		.	.	.	.	.													.	.	.	.	.	.	.	.	.	.																												.
Alig confidence																									.		.	.	.	.	.													.	.	.	.	.	.	.	.	.	.																												.
Template Conservation
Template Sequence		L	A	P	Q	K	P	A	P	P	L	D	T	D	R	F	V	L	L	V	S	G	L	G	L	G	G	G	G	G	E	S	L	L	G	T	Q	L	L	V	D	V	V	T	G	Q	L	G	D	E	G	E	Q	C	S	A	A	H	V	S	R	V	I	L	A	G	N	L	L	S	H	L	T	K	K	T	Q	A	A	S	V
Template Known Secondary structure												S	S												B	T	S	S																	T	S	S	S									T	T								S		S	B
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
														67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																																						.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																																																						.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	L	L	E	Q	H	W	V	C	A	V	R	G	N	H	E	Q	M	A	M	D	A	L	A	S	Q	Q	M	S	L	W	L	M	N	G	G	D	W	F	I	A	L	A	D	N	Q	Q	K	Q	A	K	T	A	L	.	E	K	C	Q	H	L	P	F	I	L	E	V	H	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																																						.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	A	V	K	M	L	D	E	I	L	L	Q	L	S	A	S	V	P	V	D	V	M	P	G	E	F	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	T	N	Y	T	L	P	Q	Q	P	L	H	P	C	M	F	P	L	A	T	A	Y	S	T	L	Q	L	V	T	N	P	Y	Q	A	T	I
Template Known Secondary structure																		S								T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S		S	S	S	S						G	G	G						T	S	T	T						S	S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300																		.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.										.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.						.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.																																					.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.																																					.	.	.	.	.
Query Sequence		R	T	G	K	H	V	I	A	H	A	D	Y	P	D	D	V	Y	E	W	Q	K	D	V	D	L	H	Q	V	L	.	.	.	.	.	.	.	.	.	W	S	R	S	R	L	G	E	R	Q	K	G	Q	G	I	T	G	A	D	H	F	W	F	G	H	T	P	L	R	H	R	V	D	I	G	N	.	.	.	.	.	L
Query Conservation																															.	.	.	.	.	.	.	.	.																																					.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.																																					.	.	.	.	.
Template Conservation
Template Sequence		D	G	V	R	F	L	G	T	S	G	Q	N	V	S	D	I	F	R	Y	S	S	M	E	D	H	L	E	I	L	E	W	T	L	R	V	R	H	I	S	P	T	A	P	D	T	K	T	D	P	F	I	F	P	E	C	P	H	V	Y	F	C	G	N	T	P	S	F	G	S	K	I	I	R	G	P	E	D	Q	T	V
Template Known Secondary structure		T	T							S	S										S															B	T		S		T	T	S							T	T	S		S	S			S								S	S									S	S
Template Predicted Secondary structure
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
		200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		H	Y	I	D	T	G	A	V	F	.	G	G	E	L	T	L	V	Q	L	Q
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		L	L	V	T	V	P	D	F	S	A	T	Q	T	A	C	L	V	N	L	R
Template Known Secondary structure																				T	T
Template Predicted Secondary structure
Template SS confidence
		424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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