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Job DescriptionP55798
Confidence100.00%DateThu Jan 5 12:06:12 GMT 2012
Rank4Aligned Residues213
% Identity17%Templatec2zbmA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:protein-tyrosine-phosphatase; PDBTitle: crystal structure of i115m mutant cold-active protein2 tyrosine phosphatase
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40..... ....50.........60.........70
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Query Sequence  MKQPAPVYQRIAGHQWRHIWLSGDIHGCLEQLRRKLWHCRFDPWR. . . . . . . DLLISVGDVIDRGPQSLRCLQLLEQ. . .
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Template Sequence  LSSEIKQIMPDTYLGIKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDMFDRGHQVNEVLWFMYQLDQ
Template Known Secondary structure 

SGGGS


S






TT
TTSB
TTS
B

TT

S

SSSSS
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   55....60.........70.........80.........90.........100.........110.........120.........130....
 
   71........80.........90.........100.........110.........120.........130.........140....
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Query Sequence  . . . . . . HWVCAVRGNHEQMAMDALASQQMSLWLMNGGDWFIALADNQQKQAKTALEKCQHLPFILEVHSRTGKHVIAHAD
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Template Sequence  QARDAGGMVHLLMGNHEQMVLGGDLRYVHQRYDIATTLINRPYNKLYGA. DTEIGQWLRSKNTIIKI. . . . NDVLYMHGG
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T

TT

TTTS
GGGGGST.TBT

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   135....140.........150.........160.........170.........180... ......190.........200 .........
 
   145....150.........160. ........170.. .......180.........190
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Query Sequence  YPDDVYEWQKDVDLHQV. . . . . . . . . . . . . . . . . . . . . . . . . . . . LWSRSRLGERQ. . . . . . KGQGITGADHFWFGHTPL
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Template Sequence  ISSEWISRELTLDKANALYRANVDASKKSLKADDLLNFLFFGNGPTWYRGYFSETFTEAELDTILQHFNVNHIVVGHTSQ
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TT

TTS
SSTTSTTT

GGGSTT

T
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   210.........220.........230.........240.........250.........260.........270.........280.........
 
   191..... ...200.........210........
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Query Sequence  RHRVDI. . GNLHYIDTGAVFGGELTLVQLQ
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Template Sequence  ERVLGLFHNKVIAVDSSIKVGKSGELLLLE
Template Known Secondary structure  SS
TTTT



GGGSS


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   290.........300.........310.........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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