Job Description P55798 Confidence 99.84% Date Thu Jan 5 12:06:12 GMT 2012 Rank 23 Aligned Residues 145 % Identity 18% Template c2kknA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of themotoga maritima protein tm1076:2 northeast structural genomics consortium target vt57 Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	H	I	W	L	S	G	D	I	H	G	C	L	E	Q	L	R	R	K	L	W	H	C	R	F	D	P	W	R	D	L	L	I	S	V	G	D	V	I	D	R	G	P	Q	S	L	R	C	L	Q	L	L	E	Q	H	W	V	C	A	V	R	G	N	H	E	Q	M	A	M	D	A	L	A	S	Q	Q	M	S	L	W
Query Conservation
Alig confidence																																									.	.													.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.													.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	R	F	L	L	I	S	D	S	H	V	P	V	R	M	A	S	L	P	D	E	I	L	N	S	L	K	E	Y	D	G	V	I	G	L	G	D	Y	V	.	.	D	L	D	T	V	I	L	L	E	K	F	S	.	K	E	F	Y	G	V	H	G	N	M	D	Y	P	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												B	T	T	T	T										G	G	G	G		S					S	S		B	S	.	.												T	.	S	S							S	S	S		G	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																									.	.													.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	N	G	G	D	W	F	I	A	L	A	D	N	Q	Q	K	Q	A	K	T	A	L	E	K	C	Q	H	L	P	F	I	L	E	V	H	S	R	T	G	K	H	V	I	A	H	A	D	Y	P	D	D	V	Y	E	W	Q	K	D	V	D	L	H	Q	V	L	W	S	R	S	R	L	G	E	R	Q	K	G	Q	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	K	E	H	L	P	F	S	K	V	L	L	V	E	G	V	T	I	G	M	C	H	G	W	G	A	P	W	D	L	K	D	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	K	V	F
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	G	T	S		S							T	T								S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																									66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.																			100	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	G	A	D	H	F	W	F	G	H	T	P	L	R	H	R	V	D	I	G	N	L	H	Y	I	D	T	G	A	V	F	G	G	E	L	T	L	V	Q	L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	E	K	P	Q	V	I	L	F	G	H	T	H	E	P	E	D	T	V	K	A	G	V	R	F	L	N	P	G	S	L	A	E	G	S	Y	A	V	L	E	L	D
Template Known Secondary structure		S	S			S						S		S	S							T	T									T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions