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Job DescriptionP55798
Confidence99.96%DateThu Jan 5 12:06:12 GMT 2012
Rank9Aligned Residues198
% Identity17%Templatec2jogA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:calmodulin-dependent calcineurin a subunit alpha PDBTitle: structure of the calcineurin-nfat complex
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60........ .70....
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Query Sequence  MKQPAPVYQRIAGHQWRHIWLSGDIHGCLEQLRRKLWHCRFDPWRDLLISVGDVIDRGPQSLRCLQLL. . . . . . EQHWVC
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Template Sequence  ILRQEKNLLDIDAP. . . . VTVCGDIHGQFFDLMKLFEVGGS. PANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLF
Template Known Secondary structure  S
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   71........80.... .....90.........100....... ..110.........120.........130.........140.....
 
   75....80.........90.........100.........110.........120.........130.........140.........150...
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Query Sequence  AVRGNHEQMAMDALASQQMSLWLMNGGDWFIALADNQQKQAKTALEKCQHLPFILEVHSRTGKHVIAHADYPDDVYEWQ.
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Template Sequence  LLRGNHECRHLTEYFTFKQECKIKY. . . . . . . . . . . SERVYDACMDAFDCLPLAALM. . . NQQFLCVHGGLSPEINTLDD
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   146...150.........160.........170 .........180.........190. ........200.........210.
 
   154.....160....... ..170.........180.........190.......
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Query Sequence  . . . . . . . . . . . KDVDLHQVLWSRSR. . . . . . . . . . . . . . . . . . . . . . . . . LGERQKGQGITGADHFWFGHTPLRHRVDIG
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Template Sequence  IRKLDRFKEPPAYGPMCDILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMY
Template Known Secondary structure  TS

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SSS

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   212.......220.........230.........240.........250.........260.........270.........280.........290.
 
   198 .200.........210.. .....
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Query Sequence  N. . . . . . . . . LHYIDTGAVFGGEL. . . TLVQL
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Template Sequence  RKSQTTGFPSLITIFSAPNYLDVYNNKAAVLK
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   292.......300.........310.........320...
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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