Job Description P55798 Confidence 98.80% Date Thu Jan 5 12:06:12 GMT 2012 Rank 41 Aligned Residues 184 % Identity 12% Template c1oidA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:protein usha; PDBTitle: 5'-nucleotidase (e. coli) with an engineered disulfide2 bridge (s228c, p513c) Resolution 2.1 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		18	.	20	.	.	.	.	.	.	.	.															.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.						60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.															.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.															.
Query Sequence		H	I	W	L	S	G	D	I	H	G	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	Q	L	R	R	K	L	W	H	C	R	F	D	P	W	R	D	L	L	I	S	V	G	D	V	I	D	R	G	P	.	.	.	.	.	Q	S	L	R	C	L	Q	L	L	E	Q	H	W	V	.	C	A	V	R
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.															.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.															.
Template Conservation
Template Sequence		T	V	L	H	T	N	D	H	H	G	H	F	W	R	N	E	Y	G	E	Y	G	L	A	A	Q	K	T	L	V	D	G	I	R	K	E	V	A	A	E	G	G	S	V	L	L	L	S	G	G	D	I	N	T	G	V	P	E	S	D	L	Q	D	A	E	P	D	F	R	G	M	N	L	V	G	Y	D	A	M	A	I
Template Known Secondary structure										T	T			S			T	T	S																					T	T									S			S	S	S						T	T	T	T											T
Template Predicted Secondary structure
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		78	.	80	.						.	.	.	.	.	.	.	.	90	.	.	.																																								.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure						.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	N	H	E	.	.	.	.	.	Q	M	A	M	D	A	L	A	S	Q	Q	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	W	L	M	N	G	G	D	W	F	I	A	L	A	D	N	Q	Q	K
Query Conservation						.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	N	H	E	F	D	N	P	L	T	V	L	R	Q	Q	E	K	W	A	K	F	P	L	L	S	A	N	I	Y	Q	K	S	T	G	E	R	L	F	K	P	W	A	L	F	K	R	Q	D	L	K	I	A	V	I	G	L	T	T	D	D	T	A	K	I	G	N	P	E	Y	F	T	D	I	E	F	R	K	P	A	D
Template Known Secondary structure			G	G	G	G	S	S													S	S					S	S				T	T	T			B	S	S									T	T											T	T					S		G	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		Q	A	K	T	A	L	E	K	C	Q	H	L	P	F	I	L	E	V	H	S	R	T	G	K	H	V	I	A	H	A	D	Y	P	D	D	V	Y	E	W	Q	K	D	V	D	L	H	Q	V	L	W	S	R	S	R	L	G	E	R	Q	K	G	Q	G	I	T	G	A	D	H	F	W	F	G	H	T	P	L	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.																			.	.	.
Template Conservation																	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.
Template Sequence		E	A	K	L	V	I	Q	E	L	Q	Q	T	E	K	P	.	.	.	.	.	.	D	I	I	I	A	A	T	H	M	G	H	Y	D	N	G	E	H	G	C	N	A	P	G	D	V	E	M	A	.	.	.	.	.	.	.	.	.	.	R	A	L	P	A	G	S	L	A	M	I	V	G	G	H	S	Q	D	P	V	C
Template Known Secondary structure													T	T			.	.	.	.	.	.	S								S				G	G	G			T	T	S									.	.	.	.	.	.	.	.	.	.			S		T	T	S	S	S						S	S			B
Template Predicted Secondary structure																	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.							210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.											.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
																		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	H	R	V	D	I	G	N	L	H	Y	I	D	T	G	A	V	F	G	G	E	L	T	L	V	Q	L	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation																																		.
Template Sequence		M	A	A	E	N	K	K	Q	V	D	Y	V	P	G	T	P	C	K	P	D	Q	Q	N	G	I	W	I	V	Q	A	H	E	.	W	G	K	Y	V	G	R	A	D	F	E
Template Known Secondary structure					T	T				S	S			T	T	S								T	T						B		S	.	T	T	S
Template Predicted Secondary structure																																		.
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290		.	.	.	.	.	.	.	.	.	300	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions