Job Description P38392 Confidence 22.51% Date Thu Jan 5 11:58:06 GMT 2012 Rank 8 Aligned Residues 71 % Identity 13% Template d1sfxa_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain TrmB-like Resolution 1.55

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		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.											.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140									.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Query Sequence		L	S	E	K	E	I	A	V	F	K	D	F	L	K	T	G	N	L	I	I	T	S	P	C	R	N	P	V	.	.	.	.	.	.	.	.	.	.	M	K	K	L	E	R	K	G	I	I	Q	H	Q	S	D	S	A	N	C	S	Y	Y	L	.	.	.	.	.	.	.	.	V	T	E	K	Y	S	H	F	M	K	L
Query Conservation																														.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Alig confidence											.																			.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Template Conservation											.
Template Sequence		F	K	P	S	D	V	R	I	Y	.	S	L	L	L	E	R	G	G	X	R	V	S	E	I	A	R	E	L	D	L	S	A	R	F	V	R	D	R	L	K	V	L	L	K	R	G	F	V	R	R	E	I	V	E	K	G	W	V	G	Y	I	Y	S	A	E	K	P	E	K	V	L	K	E	F	K	S	S	I	L	G
Template Known Secondary structure											.									B										T																T	T	S								S	S	S
Template Predicted Secondary structure											.
Template SS confidence
		17	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	W	N	S	R	S	R	R	F	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	I	E	R	I	E	K	X	F	T
Template Known Secondary structure								T	T	S
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions