Return to main results Retrieve Phyre Job Id

Job DescriptionP38392
Confidence15.66%DateThu Jan 5 11:58:06 GMT 2012
Rank16Aligned Residues18
% Identity33%Templated1s58a_
SCOP infoNucleoplasmin-like/VP (viral coat and capsid proteins) ssDNA viruses Parvoviridae-like VP
Resolution3.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40........
Predicted Secondary structure 




Query SS confidence 

















Query Sequence  LWLIPKEFTVAFNAYTEI
Query Conservation 




  


 



  
Alig confidence 

















Template Conservation   



 


 


 
   
Template Sequence  LFFSPLEFQHLIENYGSI
Template Known Secondary structure  S
T
S
B
Template Predicted Secondary structure 






Template SS confidence 

















   97..100.........110....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions