Return to main results Retrieve Phyre Job Id

Job DescriptionP38392
Confidence5.45%DateThu Jan 5 11:58:06 GMT 2012
Rank69Aligned Residues74
% Identity11%Templated1pq9a_
SCOP infoNuclear receptor ligand-binding domain Nuclear receptor ligand-binding domain Nuclear receptor ligand-binding domain
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40.........50.........60.........70.........80.........90.........
Predicted Secondary structure 





Query SS confidence 











































































Query Sequence  IIIFGLTLWLIPKEFTVAFNAYTEIPWLFQIIVFAFSFVVAISFSRLRAHIQKHYSLLPEQRVLLRLSEKEIAVFK
Query Conservation 



 






  


 



  

 
 

  

 





   
               


  




  

 
Alig confidence 













..



























































Template Conservation    






  

 ..  
     

 

     

  
     
    

  

  
  

 
     
 
   
Template Sequence  YALLIAINIFSADR. . PNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALR
Template Known Secondary structure  T
TTS..TT
S

TT
TT
Template Predicted Secondary structure 



..









Template SS confidence 











































































   370.........380... ......390.........400.........410.........420.........430.........440...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions