Job Description P38392 Confidence 4.83% Date Thu Jan 5 11:58:06 GMT 2012 Rank 74 Aligned Residues 97 % Identity 16% Template d1lj9a_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators Resolution 1.60

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.										.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.
Query Sequence		V	A	I	S	F	S	R	L	R	A	H	I	Q	K	H	Y	S	L	L	P	E	Q	R	V	L	L	R	L	S	E	K	E	I	A	V	F	K	D	F	L	K	T	G	N	L	I	.	.	.	.	.	.	.	.	.	I	T	S	P	C	R	N	P	V	M	K	K	L	E	R	K	G	I	I	Q	H	Q	S	D	S
Query Conservation																																																.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.																						.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.
Template Sequence		I	L	R	E	I	G	M	I	A	R	A	L	D	S	I	S	N	I	E	F	K	E	.	.	.	L	S	L	T	R	G	Q	Y	L	Y	L	V	R	V	C	E	N	P	G	I	I	Q	E	K	I	A	E	L	I	K	V	D	R	T	T	A	A	R	A	I	K	R	L	E	E	Q	G	F	I	Y	R	Q	E	D	A
Template Known Secondary structure																					T	G	G	.	.	.	G	T		T	T	T											S	T	T											T																T	T	S							S
Template Predicted Secondary structure																								.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.				.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		134	.	.	.	.	.	140			.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		A	N	C	S	Y	Y	L	.	.	V	T	E	K	Y	S	H	F	M	K	L	F	W	N	S	R	S	R	R	F	N	R
Query Conservation									.	.
Alig confidence									.	.
Template Conservation
Template Sequence		S	N	K	K	I	K	R	I	Y	A	T	E	K	G	K	N	V	Y	P	I	I	V	R	E	N	Q	H	S	N	Q	V
Template Known Secondary structure		S		T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions