Job Description P38392 Confidence 8.69% Date Thu Jan 5 11:58:06 GMT 2012 Rank 42 Aligned Residues 63 % Identity 22% Template c4a5mH_ PDB info PDB header:transcription Chain: H: PDB Molecule:uncharacterized hth-type transcriptional regulator yybr; PDBTitle: redox regulator hypr in its oxidized form Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		82	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100										.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure														.								.	.	.	.	.	.	.	.	.																													.	.
Query SS confidence														.								.	.	.	.	.	.	.	.	.																													.	.
Query Sequence		P	E	Q	R	V	L	L	R	L	S	E	K	.	E	I	A	V	F	K	D	.	.	.	.	.	.	.	.	.	F	L	K	T	G	N	L	I	I	T	S	P	C	R	N	P	V	M	K	K	L	E	R	K	G	I	I	Q	.	.	H	Q	S	D	S	A	N	C	S	Y	Y	L	V	T	E	K
Query Conservation														.								.	.	.	.	.	.	.	.	.																													.	.
Alig confidence														.								.	.	.	.	.	.	.	.	.																													.	.
Template Conservation
Template Sequence		P	V	E	F	T	L	D	V	I	G	G	K	W	K	G	I	L	F	Y	H	M	I	D	G	K	K	R	F	N	E	F	R	R	I	C	P	S	I	T	Q	R	M	L	T	L	Q	L	R	E	L	E	A	D	G	I	V	H	R	E	V	Y	H	Q	V	P	P	K	V	E	Y	S	L	T	E	F
Template Known Secondary structure												S	S	S										T	S											S	T	T	S															T	T	S							S	S	S	S									T	T
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions