Job Description P02943 Confidence 7.44% Date Thu Jan 5 10:57:48 GMT 2012 Rank 34 Aligned Residues 109 % Identity 8% Template d1p4ta_ SCOP info Transmembrane beta-barrels OMPA-like Outer membrane protein Resolution 2.55

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	D	M	M	Y	V	G	M	Y	Q	D	I	N	W	D	N	D	N	G	T	K	W	W	T	V	G	I	R	P	M	Y	K	W	T	P	I	M	S	T	V	M	E	I	G	Y	D	N	V	E	S	Q	R	T	G	D	K	N	N	Q	Y	K	I	T	L	A	Q	Q	W	Q	A	G	D	S	I	W	S	R	P	A	I
Query Conservation
Alig confidence																				.																	.											.
Template Conservation																				.																	.											.
Template Sequence		F	Y	V	Q	A	D	A	A	H	A	K	A	S	S	S	L	G	S	.	A	K	G	F	S	P	R	I	S	A	G	Y	R	I	N	D	.	L	R	F	A	V	D	Y	T	R	Y	.	K	N	Y	K	A	P	S	T	D	F	K	L	Y	S	I	G	A	S	A	I	Y	D	F	D	T	Q	S	P	V	K	P	Y	L
Template Known Secondary structure																S	S			.															T	T	.											.			S	S			S	S																		S	S	S
Template Predicted Secondary structure																				.																	.											.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	F	A	T	Y	A	K	W	D	E	K	W	G	Y	D	Y	T	G	N	A	D	N	N	A	N	F	G	K	A	V	P	A	D	F	N	G	G	S	F	G	R	G	D	S	D	E	W	T	F	G	A	Q	M	E	I
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	A	R	L	S	L	N	R	A	S	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	G	G	S	D	S	F	S	Q	T	S	I	G	L	G	V	L	T	G	V
Template Known Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.																									.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions