Job Description P02943 Confidence 5.81% Date Thu Jan 5 10:57:48 GMT 2012 Rank 40 Aligned Residues 114 % Identity 15% Template c3dwoX_ PDB info PDB header:membrane protein Chain: X: PDB Molecule:probable outer membrane protein; PDBTitle: crystal structure of a pseudomonas aeruginosa fadl homologue Resolution 2.20 Å

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		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	E	L	G	V	D	Y	G	R	A	N	L	R	D	N	Y	R	L	V	D	G	A	S	K	D	G	W	L	F	T	A	E	H	T	Q	S	V	L	K	G	F	N	K	F	V	V	Q	Y	A	T	D	S	M	T	S	Q	G	K	G	L	S	Q	G	S	G	V	A	F	D	N	E	K	F	A	Y	N	I	N	N
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	A	S	L	D	W	V	H	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	N	D	R	L	S	L	G	A	S	A	T	W	T	E	W	S	S	F	Q	D	L	T	L	K	S	H	G	N	T	I	V	S	I	P	Y	T	Y	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	S												G	G	G									T	T												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		287	.	.	290	.	.	.	.	.															.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.									.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure																																					.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.
Query Sequence		N	G	H	M	L	R	I	L	D	H	G	A	I	S	M	G	D	N	W	D	M	M	Y	V	G	M	Y	Q	D	I	N	W	D	N	D	.	.	.	.	.	.	.	.	N	G	T	K	W	W	T	V	G	I	R	P	M	Y	K	W	T	P	I	M	S	T	V	M	E	I	G	Y	D	N	V	E	S	Q	R
Query Conservation																																					.	.	.	.	.	.	.	.
Alig confidence		.	.																																		.	.	.	.	.	.	.	.												.	.
Template Conservation		.	.																																																					.	.
Template Sequence		.	.	N	T	W	T	L	A	V	G	G	D	Y	K	V	T	D	Q	W	T	M	R	A	G	V	A	Y	D	Q	T	P	T	H	N	A	T	R	D	P	R	I	P	D	G	D	R	Y	F	A	S	L	G	A	G	.	.	Y	R	F	Q	S	M	P	E	L	S	I	D	A	A	Y	S	R	Q	F	V	K	E
Template Known Secondary structure		.	.													S	S	S	S													S			T	T	T			S	S	S														.	.				S	S	S	S	S
Template Predicted Secondary structure		.	.																																																					.	.
Template SS confidence
				335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.			.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions