Job Description P02943 Confidence 8.80% Date Thu Jan 5 10:57:48 GMT 2012 Rank 30 Aligned Residues 203 % Identity 9% Template c3aehB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:hemoglobin-binding protease hbp autotransporter; PDBTitle: integral membrane domain of autotransporter hbp Resolution 2.00 Å

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		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.							.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.																																							.
Query SS confidence																			.	.	.	.	.	.																																							.
Query Sequence		F	D	V	R	L	A	Q	M	E	I	N	P	G	G	T	L	E	.	.	.	.	.	.	L	G	V	D	Y	G	R	A	N	L	R	D	N	Y	R	L	V	D	G	A	S	K	D	G	W	L	F	T	A	E	H	T	Q	S	V	L	K	G	.	F	N	K	F	V	V	Q	Y	A	T	D	S	M	T	S	Q	G	K
Query Conservation																			.	.	.	.	.	.																																							.
Alig confidence																			.	.	.	.	.	.																																							.
Template Conservation
Template Sequence		F	T	D	H	Y	T	L	L	Q	M	G	A	D	R	K	H	E	L	G	S	M	D	L	F	T	G	V	M	A	T	Y	T	D	T	D	A	S	A	D	L	Y	S	G	K	T	K	S	W	G	G	G	F	Y	A	S	G	L	F	R	S	G	A	Y	F	D	V	I	A	K	Y	I	H	N	E	N	K	Y	D	L	N
Template Known Secondary structure																				T	T																			T	T																			T	T	S																			S
Template Predicted Secondary structure
Template SS confidence
		1133	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.			.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.		.	.	.	.
Predicted Secondary structure																																															.	.																													.
Query SS confidence																																															.	.																													.
Query Sequence		G	L	S	Q	G	S	G	V	A	F	D	N	E	K	F	A	Y	N	I	N	N	N	G	H	M	L	R	I	L	D	H	G	A	I	S	M	G	D	N	W	D	M	M	Y	V	.	.	G	M	Y	Q	D	I	N	W	D	N	D	N	G	T	K	W	W	T	V	G	I	R	P	M	Y	K	W	T	.	P	I	M	S
Query Conservation																																															.	.																													.
Alig confidence									.	.	.	.	.	.	.	.	.	.																													.	.																													.
Template Conservation									.	.	.	.	.	.	.	.	.	.
Template Sequence		F	A	G	A	G	K	Q	.	.	.	.	.	.	.	.	.	.	N	F	R	S	H	S	L	Y	A	G	A	E	V	G	Y	R	Y	H	L	T	D	T	T	F	V	E	P	Q	A	E	L	V	W	G	R	L	Q	G	Q	N	S	V	N	P	L	V	G	R	T	G	V	V	S	G	K	T	F	S	G	K	D	W	S
Template Known Secondary structure		S	T	T					.	.	.	.	.	.	.	.	.	.																					T	T																																						S	S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1213	.	.	.	.	.	.											1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	M	E	I	G	Y	D	N	V	E	S	Q	R	T	G	D	K	N	N	Q	Y	K	I	T	L	A	Q	Q	W	Q	A	G	D	S	I	W	S	R	P	A	I	R	V	F	A	T	Y	A	K	W	D	E	K	W	G	Y	D	Y	T	G	N	A	D	N	N	A	N	F	G	K	A	V	P	A	D	F	N	G	G
Query Conservation
Alig confidence																																			.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	A	R	A	G	L	H	Y	E	F	D	L	T	D	S	R	K	D	S	R	M	L	Y	G	V	G	L	N	A	R	F	G	.	.	.	.	D	N	T	R	L	G	L	E	V	E	R	S	A	F	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure															S																			T	.	.	.	.	T	T												S		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																			.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1298	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330					.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.
		427	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	G	R	G	D	S	D	E	W	T	F	G	A	Q	M	E
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	Y	N	T	D	D	A	I	N	A	N	I	R	Y	S
Template Known Secondary structure		.	.	.	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					1363	.	.	.	.	.	.	1370	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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