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Job DescriptionP02943
Confidence57.53%DateThu Jan 5 10:57:48 GMT 2012
Rank18Aligned Residues117
% Identity11%Templatec2k0lA_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:outer membrane protein a; PDBTitle: nmr structure of the transmembrane domain of the outer2 membrane protein a from klebsiella pneumoniae in dhpc3 micelles.
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   278.280.........290.........300.........310....... ..320.........330.........340.........350.
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Query Sequence  AFDNEKFAYNINNNGHMLRILDHGAISMGDNWDMMYVGMY. . . . . . QDINWDNDNGTKWWTVGIRPMYKWTPIMSTVMEI
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Template Sequence  FYGNGFQNNNGPTRNDQLGAGAFGGYQVNPYLGFEMGYDWLGRMAYKGSVDNGAFKAQGVQLTAKLGYPITDDLDIYTRL
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   35....40.........50.........60.........70.........80.........90.........100.........110....
 
   352.......360.. .......370.........380.........390....
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Query Sequence  GYDNVESQRTG. . . . . . DKNNQYKITLAQQWQAGDSIWSRPAIRVFATY
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Template Sequence  GGMVWRADSKGNYASTGVSRSEHDTGVSPVFAGGVEWAVTRDIATRLEY
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   115....120.........130.........140.........150.........160...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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