Return to main results Retrieve Phyre Job Id

Job DescriptionP0AE70
Confidence27.89%DateThu Jan 5 11:22:39 GMT 2012
Rank12Aligned Residues42
% Identity12%Templated1cxqa_
SCOP infoRibonuclease H-like motif Ribonuclease H-like Retroviral integrase, catalytic domain
Resolution1.02

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50.....
Predicted Secondary structure 




























Query SS confidence 















































Query Sequence  DMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPCTTQS
Query Conservation 




  
 
    
 
  
 

 



    
     


 



  
Alig confidence 









..














....
















Template Conservation   
   
  
 ..          



 ....

  
            
Template Sequence  GPLQIWQTDF. . TLEPRMAPRSWLAVT. . . . VDTASSAIVVTQHGRVT
Template Known Secondary structure  S


..
GGGTTS
....TTT

SS

Template Predicted Secondary structure 



..




....














Template SS confidence 















































   56...60..... ....70.........80 .........90.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions